Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_H16
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119001-1|AAM50861.1|  503|Drosophila melanogaster LP02983p pro...    29   7.5  
AE014296-3298|AAF49053.3|  338|Drosophila melanogaster CG17147-P...    29   7.5  
AE014134-3196|AAF53870.1|  651|Drosophila melanogaster CG10730-P...    29   7.5  
U31351-1|AAB97618.1|  810|Drosophila melanogaster protein ( Dros...    28   9.9  
AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adapti...    28   9.9  

>AY119001-1|AAM50861.1|  503|Drosophila melanogaster LP02983p
           protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 17  KXFKRINVT---CKQCSRILTINTLSPRYIQS*TEY 115
           K FK+ N T    + CS I T N L P +++  T+Y
Sbjct: 127 KRFKKANYTTAFAEDCSSISTFNYLKPGFVKQPTDY 162


>AE014296-3298|AAF49053.3|  338|Drosophila melanogaster CG17147-PA
           protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 215 TQHKNITNCKYIYCCSRTSNHHTQS 141
           T+ +N  +C Y Y C +T NH ++S
Sbjct: 157 TKFRNEKDCAYYYECDKTGNHASKS 181


>AE014134-3196|AAF53870.1|  651|Drosophila melanogaster CG10730-PA
           protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 17  KXFKRINVT---CKQCSRILTINTLSPRYIQS*TEY 115
           K FK+ N T    + CS I T N L P +++  T+Y
Sbjct: 275 KRFKKANYTTAFAEDCSSISTFNYLKPGFVKQPTDY 310


>U31351-1|AAB97618.1|  810|Drosophila melanogaster protein (
           Drosophila melanogastergarnet mRNA, complete cds. ).
          Length = 810

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 256 VFIHTYMCILYYYHDIIFCMLLYVIIYI 339
           ++I+ Y+C  Y Y     C LL+ I+ +
Sbjct: 116 IYIYIYICYRYCYRCCCHCQLLFAIVVV 143


>AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adaptin
           subunit of AP-3 protein.
          Length = 810

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 256 VFIHTYMCILYYYHDIIFCMLLYVIIYI 339
           ++I+ Y+C  Y Y     C LL+ I+ +
Sbjct: 116 IYIYIYICYRYCYRCCCHCQLLFAIVVV 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,802,150
Number of Sequences: 53049
Number of extensions: 535894
Number of successful extensions: 969
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)