Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_H16
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27079-7|CAA81592.1|  293|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC025726-29|AAK73931.2| 1098|Caenorhabditis elegans Hypothetical...    29   3.9  
Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z72508-7|CAA96642.1|  336|Caenorhabditis elegans Hypothetical pr...    28   6.8  

>Z27079-7|CAA81592.1|  293|Caenorhabditis elegans Hypothetical
           protein T05G5.7 protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 200 ITNCKYIYCCSRTSNHHTQSLGSGL 126
           I+ C +++CC+R     T+SL S L
Sbjct: 30  ISECSFLFCCARAREKLTRSLSSRL 54


>AC025726-29|AAK73931.2| 1098|Caenorhabditis elegans Hypothetical
           protein Y71G12B.5 protein.
          Length = 1098

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 128 DHFQDSGCGDWTFLNSNKYIYN 193
           D +    CG+  FLNS++Y+YN
Sbjct: 899 DDYTFQACGEKCFLNSSRYMYN 920


>Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical
           protein R08D7.4 protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -2

Query: 450 IPYQLTKGGVETCVRCIIYCEN--NKIDNNITYRYKHIRY 337
           IP QL K  VE C++   Y EN  N + NN       IRY
Sbjct: 56  IPDQLMKDIVEQCIKDSEYAENLCNNVFNNEIVTSHEIRY 95


>Z72508-7|CAA96642.1|  336|Caenorhabditis elegans Hypothetical
           protein F28H7.11 protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 161 TFLNSNKYIYNLLYFYVVYMIIYVCEYTNIL*CLYIHICVFYIIIMT*Y 307
           T+LN   Y Y L YF +  M   +C+ T +  C++ +   F I +   Y
Sbjct: 33  TYLNMGSYKYLLFYFSIFNMSCSLCD-TFVPICIFNYRYAFTIFVADGY 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,051,423
Number of Sequences: 27780
Number of extensions: 290022
Number of successful extensions: 693
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)