Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_H14
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 245 4e-65
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 2.4
AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical ... 29 3.2
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 29 4.2
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 29 4.2
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical protein
C47E8.5 protein.
Length = 702
Score = 245 bits (599), Expect = 4e-65
Identities = 119/162 (73%), Positives = 138/162 (85%), Gaps = 1/162 (0%)
Frame = -3
Query: 768 LCKVMKNILDNKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMKAQALRDTSTMGYMAA 589
LCKV+K+IL+ KVEKV VSNRLV SPCCIVT++YGWSANMERIMKAQALRD+STMGYMAA
Sbjct: 541 LCKVIKDILEKKVEKVGVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAA 600
Query: 588 KKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYR 409
KKHLEINPDH+I++TLR + E DKNDK VKDLV+LL+ETALL+SGF+L+EPQ HASRIYR
Sbjct: 601 KKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHASRIYR 660
Query: 408 MIKLGLGIDEDEPIQVEEPASGDV-PPLEGDADDASRMEEVD 286
MIKLGL I +DE P+S +EG +DASRMEEVD
Sbjct: 661 MIKLGLDIGDDEIEDSAVPSSCTAEAKIEGAEEDASRMEEVD 702
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical protein
T05E11.3 protein.
Length = 760
Score = 106 bits (255), Expect = 2e-23
Identities = 58/154 (37%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Frame = -3
Query: 744 LDNKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMKAQAL---RDTSTMGYMAAKKHLE 574
L + +EK VVS RLV+SP +V + YGWS NMERIMK+QA +D + Y KK E
Sbjct: 604 LKDLIEKAVVSQRLVKSPSALVASSYGWSGNMERIMKSQAYAKAKDPTQDFYATQKKTFE 663
Query: 573 INPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLG 394
INP H +++ L ++ A + D LL+ETA L SGF+L + A RI +++
Sbjct: 664 INPRHPVIKELLKRVTASEEDTTAASTAKLLFETATLRSGFSLQDQVGFADRIEAVLRQS 723
Query: 393 LGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 292
L + +D ++ E+ P E +A + + +EE
Sbjct: 724 LDVSQDAQVETEQHIEEAEP--EPEAAEETTIEE 755
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 276 RDLNQLPPCEMHHQHHPPMAARLQKQALQPES 371
RD PP HHQ HPP LQ P++
Sbjct: 1605 RDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQN 1636
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 276 RDLNQLPPCEMHHQHHPPMAARLQKQALQPES 371
RD PP HHQ HPP LQ P++
Sbjct: 1766 RDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQN 1797
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 381 EDEPIQVEEPASGDVPPLEGDADDASRMEEVD*D 280
++EP++VEEP V P EGD AS E + D
Sbjct: 182 DEEPVEVEEPV---VEPTEGDEQMASSSEHITKD 212
>AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical
protein Y41D4A.6 protein.
Length = 452
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 450 TLDEPQVHAS---RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEG 322
+LD P + A + + +++L GID+++ VE P + LEG
Sbjct: 184 SLDAPSIFAKTAQKCWELLELSKGIDKNDSTSVELPEKAGISSLEG 229
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 288 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 386
QL HH HH P AA+ A+ P S + Q
Sbjct: 83 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 115
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 288 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 386
QL HH HH P AA+ A+ P S + Q
Sbjct: 83 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 115
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 288 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 386
QL HH HH P AA+ A+ P S + Q
Sbjct: 116 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 148
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 288 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 386
QL HH HH P AA+ A+ P S + Q
Sbjct: 116 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 148
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 207 KSVFGCTPMHKNKPL*HGSYS*SRDLNQLPPCEMHHQHHPPMAARLQKQALQ 362
K + G +P+ KNK Y S D+ P C H H P + + K+AL+
Sbjct: 301 KKIIGESPVLKNKYF----YPPSNDIQGQPDCASHDDHFPYLNSPEVKKALR 348
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -3
Query: 636 KAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVI 487
K ++ S + KK + PD + + ++++ +AD N+ VK+L I
Sbjct: 70 KKSPIKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEPLVKNLKI 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,073,513
Number of Sequences: 27780
Number of extensions: 381844
Number of successful extensions: 1085
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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