Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_H13
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 324 6e-89
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.1
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.1
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.1
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.1
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.2
Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical pr... 28 9.5
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 324 bits (795), Expect = 6e-89
Identities = 146/239 (61%), Positives = 186/239 (77%)
Frame = -1
Query: 837 YFVKIIQLLDEYPKCFIVGADNVXXXXXXXXXXXXXXXXIVLMGKNTMMRKAIKDHLDNN 658
YF K+++L +EYPKC +VG DNV +LMGKNTM+RKA++ HL N
Sbjct: 13 YFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKN 72
Query: 657 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 478
P+LEKLLPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP V +P NTG+GP
Sbjct: 73 PSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGP 132
Query: 477 EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQV 298
EKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QV
Sbjct: 133 EKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQV 192
Query: 297 YDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLAI 121
YD GT++ PE+LD+ E+LR +F +GV NVA++SLA+ YPT+AS HS+ANG +N+L +
Sbjct: 193 YDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGV 251
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 51.2 bits (117), Expect = 9e-07
Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 3/173 (1%)
Frame = -1
Query: 813 LDEYPKCFIVGADNVXXXXXXXXXXXXXXXXIVLMGKNTMMRKAIKDHLDNNPA--LEKL 640
+D+Y FI N+ GKN ++ A+ + A L K
Sbjct: 34 VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKA 93
Query: 639 LPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSF 463
+KG G +FT EV + E + AR G +A +VV+P +
Sbjct: 94 SAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQ 153
Query: 462 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 304
+ L +PTK+ KG I + + K G+ + +A +L + + L+ K
Sbjct: 154 LRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = -2
Query: 716 CSWEKTL*CAKP-SKTTWTTIQPSRNCCHTSRATLASCSPAET-SWRSVTNCWRTKSKLQ 543
CSW P S+T + QP+ N R C+P +S W T S+
Sbjct: 273 CSWMIDPLATDPQSRTHYLQCQPAPNNLFCGRWQRMPCAPGTVFDVQSQVCVWDTNSQPG 332
Query: 542 LVPVPLPHCQSSFP 501
+P P P+ + P
Sbjct: 333 TLPTPAPYVSTQAP 346
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 659 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 522
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 659 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 522
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 659 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 522
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 659 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 522
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 509 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 619
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.9 protein.
Length = 679
Score = 27.9 bits (59), Expect = 9.5
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +1
Query: 64 LMNSLXGGSFFKLNLCDSSDGQK-VLETIGDGMRG*SNSWVSNSQRKSSYISNSSLELGT 240
+++S GG ++ + DS D K +LE+ +G+ G +N + QR + ++ E+
Sbjct: 190 IIDSWNGGDTKEI-MDDSDDEVKRILESGEEGLVGKNNRTLKTQQRNHTEVTLEEEEINL 248
Query: 241 EILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGF 363
E L F F+ S Y L W D +EK F
Sbjct: 249 EDLQFKSYQFKPGKSKIRTYDL------AWMDPSFLEKEEF 283
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 570 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 421
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,293,703
Number of Sequences: 27780
Number of extensions: 430151
Number of successful extensions: 1370
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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