Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_H06
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 33 0.026
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 33 0.045
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.059
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.14
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 30 0.24
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 29 0.73
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 28 1.3
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 28 1.3
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.3
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.7
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 1.7
SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subuni... 27 1.7
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 1.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.7
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 2.2
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 3.9
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 3.9
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 5.1
SPAC3H1.08c |||DUF1640 family protein|Schizosaccharomyces pombe|... 26 5.1
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 25 6.8
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 6.8
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 6.8
SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|... 25 6.8
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 9.0
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 25 9.0
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 9.0
SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 25 9.0
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 9.0
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 33.5 bits (73), Expect = 0.026
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Frame = -2
Query: 581 EICLNQNDVCKHE--VLVNNGKKPDILIAKDDAMKKLQERFLKIMSDVAD-LSDEKHRLE 411
E CL + D +H +L N + D + ++ +E+ LK +S+ + L E+H
Sbjct: 296 EECLVELDKLEHATVLLSTNQELCDQIEINKKKLEFRKEQLLKQLSNAQEKLEHEQHSRN 355
Query: 410 HIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILV 231
+ + D I E + Q+R+ + E+++ + M E + + ++ +LE
Sbjct: 356 QKLEAAKQRMDNIREEYKVITQERNKKIQETEKKNAMIEMTEQKIAGMREELE------- 408
Query: 230 KLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNS 126
S+ I+ +K ++E+ I +LL NL +++
Sbjct: 409 --SQISSITMEFEKLKSHVEL-YIAELLRNLRSSN 440
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 32.7 bits (71), Expect = 0.045
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = -2
Query: 359 ALYQQQRSLLKRRDEERSIQ---LNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQK 189
A+ + SL + RDE+ ++Q LN+ + E ++ +LE L + ++L + S K
Sbjct: 787 AILSFEDSLRRERDEKSTLQQKCLNL-QYEYENVRIELENLQSRALELESALEQSVSDAK 845
Query: 188 HSKNIEIEQIMKLLTNLNNN 129
+SK I + KLL+++N N
Sbjct: 846 YSKAIMQSGLSKLLSSINEN 865
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 32.3 bits (70), Expect = 0.059
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Frame = -2
Query: 497 DDAMKKLQERFLKIMSDVA-DLSDEKHRLEHIILQLQNETDTICEYVALYQQ-------Q 342
++A++K+Q + +++ D S+++ E+ I QLQN D + E + + Q +
Sbjct: 255 ENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDE 314
Query: 341 RSLLKRRDEERSIQLNMFETECSKLKRQLEELTAIL-VKLSEDEDISSCLQKHSKNIEIE 165
+ LKR+ EE+ + FE E + L+E AIL K E D L + +
Sbjct: 315 IATLKRQIEEKENSSSAFENEENSSYVHLQEDYAILQAKCDEFADRIQVLTADLEKEKEN 374
Query: 164 QIM 156
QIM
Sbjct: 375 QIM 377
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 31.1 bits (67), Expect = 0.14
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Frame = -2
Query: 617 DSKIDCLQ--TDDTEICLNQNDVCKHEVLVNNGKKPDILIAKDDAMKKLQ---ERFLKIM 453
DSK L D+ E+ + QN + + + KK + + KLQ E+F +
Sbjct: 338 DSKNSVLSFLKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTE 397
Query: 452 SDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECS 273
D+++ ++E L +++N+ + + Y+QQ ++ QL +
Sbjct: 398 RDISEKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEE-------QLKFLLNKEK 450
Query: 272 KLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNSL-IDPMKKSID 96
KLK+ +E A+ + SE E+ S S+ + E I L L L +D ++KS+
Sbjct: 451 KLKKSIE---ALSFEKSEAENSLSSHDIDSQKLNSE-IADLSLRLQQEELSLDDIRKSLQ 506
Query: 95 FK 90
K
Sbjct: 507 GK 508
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 30.3 bits (65), Expect = 0.24
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = -2
Query: 491 AMKKLQERFLKIMSDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEE 312
A KK L + D++ L +++ ++ +QL+NE Y+ L QQ L D+
Sbjct: 329 ACKKAANEKLAVQRDLSKLREDRLSVQRKKIQLRNE------YIKLSHQQNFL----DD- 377
Query: 311 RSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIE-QIMKL 150
++ F ++C +K +LE +T +I+ SKN +E Q+++L
Sbjct: 378 ----IDDFFSQCETVKNELENVTTTPNSTEAFSEINEYASALSKNYGLESQLVEL 428
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 28.7 bits (61), Expect = 0.73
Identities = 15/75 (20%), Positives = 38/75 (50%)
Frame = -2
Query: 476 QERFLKIMSDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQL 297
+E + S++ +L + + E I ++ +ETD + + + +++ + ++E L
Sbjct: 182 EENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNL 241
Query: 296 NMFETECSKLKRQLE 252
N F+ + L+RQ +
Sbjct: 242 NQFQIKKLSLERQYD 256
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 317 EERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHS-KNIEIEQIMKLLTN 141
EE Q + E E LK + L KLS ++ S +++H ++E IM+ L N
Sbjct: 122 EELERQAELIEAEAESLKATFKRGKKDLSKLSHLSELESRIERHKWHQDKLELIMRRLEN 181
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -2
Query: 287 ETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIE 165
+++ +L+ QLE LTA+ KLS E +SS +SK I E
Sbjct: 453 DSDVEELREQLENLTALTKKLS--ERLSSSTFDNSKFIRTE 491
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.9 bits (59), Expect = 1.3
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = -2
Query: 392 QNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFET--ECSKLKRQLEELTAILVKLSE 219
QN T T+ +Y ++ Q + + L++FE + S L+ +++ + ++
Sbjct: 292 QNLTSTLEKYKKMHLQNPN-----NFSLDFTLSIFERLRKDSSLQLTTKDINTLFSTIAL 346
Query: 218 DEDISSCLQKHSKNIEIEQIMKL---LTNLNNNSLIDPMKKSIDFKDFYPCSC 69
S KHSKN+ E+++ L +L + ID + F F CSC
Sbjct: 347 SPTKLSMASKHSKNLVSERMLYLSLMYKSLVDLKTIDSFSLKLLFLKFMICSC 399
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -2
Query: 581 EICLNQNDVCKHEVLVNNGKKPDILIAKD-DAMKKLQERFLKIMSDVADLSDEKHRLEHI 405
+I L N K+ ++ NGKK L+ ++ + +K+L ++ K+ +D L +E HR E +
Sbjct: 182 KIPLYPNGQPKYRKILENGKKVKYLLDENGEILKRLVKKEKKLKNDNERLENE-HRTEKL 240
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 1.7
Identities = 28/140 (20%), Positives = 62/140 (44%)
Frame = -2
Query: 620 LDSKIDCLQTDDTEICLNQNDVCKHEVLVNNGKKPDILIAKDDAMKKLQERFLKIMSDVA 441
L ++ +++++ + ND E VNN K ++ A +A +KL R +I
Sbjct: 902 LSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKV 961
Query: 440 DLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKR 261
D+ ++ ++ ++ TI + + ++ LK DE + + E++ +K K
Sbjct: 962 DIIGLQNASLNMQSLKDSDNRTISDLESKNKELEKKLKEADEYWLLIVEELESKRTKDKE 1021
Query: 260 QLEELTAILVKLSEDEDISS 201
L + + + + E+ SS
Sbjct: 1022 LLRQCGQAVSEDEQSEEDSS 1041
>SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subunit
Pmh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 318
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 539 LVNNGKKPDILIAKDDAMKKLQERFLKIMSDVADLSDEKHRLEHIILQLQNET 381
L +GK P+ +I D++KK QE I S V+++S L + Q+ +T
Sbjct: 197 LATSGKDPNKIIQLSDSLKKQQE---NIASSVSNISRSSSILLSDVQQVAEDT 246
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = -2
Query: 296 NMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNSLID 117
N+ T C K E++ L + DEDI+ +Q I + + N L
Sbjct: 245 NIISTACVKDDESCEKIRLTLENTNIDEDITQMIQNEGTGTTIPPLPEFNDYFKENGLNY 304
Query: 116 PMKKSIDFKDFYPCS 72
+ + I YP S
Sbjct: 305 DIDQLISKAPSYPYS 319
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.7
Identities = 29/120 (24%), Positives = 55/120 (45%)
Frame = -2
Query: 521 KPDILIAKDDAMKKLQERFLKIMSDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQ 342
K D+L K+ + L+E + L D K+ LEH++ DT + +L ++
Sbjct: 1409 KEDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHML------DDTSRKNSSLMEKI 1462
Query: 341 RSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIEQ 162
S+ D ++S +L + L++ E LS E+I S LQ+ + I++++
Sbjct: 1463 ESINSSLD-DKSFELASAVEKLGALQKLHSE------SLSLMENIKSQLQEAKEKIQVDE 1515
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 2.2
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = -2
Query: 518 PDILIAKDDAMKKLQERFLKIMSDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQR 339
PD AK++ +KLQ+ + + S DL + + +H + L N D + ++
Sbjct: 213 PDAQKAKEETKQKLQDLYEEFKSVAVDLQGDP-KYQHPVRSLLNLIDKFIDKLSEQSGNV 271
Query: 338 SLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDED 210
+ +R++Q E + L R L+ L L ++ D +
Sbjct: 272 TADTNEHYDRAMQYLKQLVE-NILNRSLDNLIDTLKQVQHDAE 313
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -2
Query: 506 IAKDDAMKKLQERFLKIMSDVADLSDEKHRLEHIILQLQNETDTI 372
++ DA+ ++ L++ VA++ E +L + QL NET+ +
Sbjct: 1 MSDQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEAL 45
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/87 (19%), Positives = 38/87 (43%)
Frame = -2
Query: 395 LQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSED 216
L++E+ + C Y+A L R S++ CS ++ + + + E+
Sbjct: 112 LKSESSSTCGYLARQAHNFLLQCFRSNVSSLRGQKVHEHCSSTEKGDDAILDCCIYYQEE 171
Query: 215 EDISSCLQKHSKNIEIEQIMKLLTNLN 135
+ I + L KN+ I+ + + +L+
Sbjct: 172 KLIPAVLLSDDKNLSIKAAVHHIQSLS 198
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 85 KSLKSILFFMGSIKELLFKFVRSFIICSISIFLEC 189
KS + + + S L +F S IC++ +F++C
Sbjct: 318 KSFSFLAYLLRSFGAALKQFESSIPICTLQLFMDC 352
>SPAC3H1.08c |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 25.8 bits (54), Expect = 5.1
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = -2
Query: 353 YQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNI 174
+QQ+R+ L+ R +I+ N F+ + + E+ K S ED+ + L + N+
Sbjct: 89 FQQKRTFLQIRKYLETIEENEFDKVRKSSDKLINEIEK--TKSSLREDVKTALSEVRLNL 146
Query: 173 EIEQ 162
+E+
Sbjct: 147 NLEK 150
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 350 QQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAI 237
Q Q+ L + +E+R I+L + + +RQ EE A+
Sbjct: 83 QHQKMLQIQAEEQRKIELQQEQERLEQERRQKEEAIAL 120
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 531 INQYFVFAYIILIQTYLSIISL*TIYFT 614
I+Q VF Y + IQ LS T+YFT
Sbjct: 505 IHQTLVFLYSLEIQNLLSQNQFPTVYFT 532
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 25.4 bits (53), Expect = 6.8
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 566 QNDVCKHEVLVNNGKKPDILIAKDDAMKKLQERFLKIMSDVADLSDEKHRLEH 408
QND KH L+ K+ ILI +++ L ER ++ S DL+ +H + +
Sbjct: 516 QNDAVKHTFLLGLSKEIKILI----SLRLLIERISEVFS--TDLTKVRHTISN 562
>SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 532
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = -2
Query: 245 TAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNSLIDPMK 108
TA+ V + +++ L+ + +NIEI Q M++ N++ + + + +K
Sbjct: 457 TAVDVNVYGVGEVTEHLRGNMENIEIGQFMEIYLNVSLSDVTEKLK 502
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.0 bits (52), Expect = 9.0
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 572 LNQNDVCKHEVLVNNGKKPDILIAKDDAMKKLQERFLKIMSDVADLSDEKHR-LEHIILQ 396
L + + + +++V +K DI+ K + + + L I+ +V L DE+ LE I+ +
Sbjct: 614 LTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEVHLLHDERGPVLESIVAR 673
Query: 395 LQNETDTICEYVAL 354
+ + E V L
Sbjct: 674 IFRHQEETLEQVRL 687
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = -2
Query: 320 DEERSIQLNMFETECSKLKRQLEEL 246
++++SI+ +E + +KLKR+LEEL
Sbjct: 62 EKQKSIR-ETYEKDINKLKRELEEL 85
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.0 bits (52), Expect = 9.0
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Frame = -2
Query: 416 LEHIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEE-LTA 240
L+ + ++ Q E D I LKRR E + + +E+E S +++ EE +++
Sbjct: 325 LDLLEMKQQEENDRISHIEYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISS 384
Query: 239 ILV----KLSEDEDISSCLQK-----HSKNIEIEQIMKLLTNLNN 132
+ + KL+E + + + L K HS + ++E++ K + ++ +
Sbjct: 385 LRIELEDKLAEIDMLRNKLLKEEHKHHSTSEKLEELSKYVASIQD 429
>SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.0 bits (52), Expect = 9.0
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -2
Query: 392 QNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDE 213
+NE +T C V LY+ +S + L+ S ++ + TA+ K +E
Sbjct: 64 KNEHETSCRSVVLYRNSKS-------AKRYPLSTKCARISYMQGNKDTKTALTKKYKSNE 116
Query: 212 DISSCLQKHSK 180
D+S +K +K
Sbjct: 117 DVSRMRKKGNK 127
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 518 PDILIAKDDAMKKLQERFLKIMSDVA-DLSDEKHRLE 411
PDIL + +MKKL +R I S + ++ +K ++E
Sbjct: 1075 PDILRKAEKSMKKLDQRVSLIPSSIEFNIKTQKDKVE 1111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,459,143
Number of Sequences: 5004
Number of extensions: 50091
Number of successful extensions: 187
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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