Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_H03
(494 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0229 + 1834102-1834358,1834442-1834901 31 0.38
03_06_0218 - 32442904-32443347,32444426-32444626,32446584-32447156 31 0.38
10_08_0233 - 16061182-16061714,16062765-16063578 31 0.51
10_08_0223 - 15986763-15987575 31 0.51
10_08_0242 - 16120554-16121129 30 0.89
10_08_0236 + 16078162-16078731 29 1.6
07_03_0923 - 22617627-22617860,22618486-22618542,22618612-226187... 29 1.6
07_03_0559 + 19475893-19476783 29 1.6
02_05_0059 - 25482207-25482271,25482432-25482651 29 1.6
06_01_0732 + 5397217-5397327,5399010-5399831 29 2.1
04_01_0352 - 4619946-4619984,4620062-4620133,4621515-4621880,462... 29 2.1
03_06_0471 + 34169562-34169892,34170121-34170347 29 2.1
11_04_0008 + 12115147-12115354,12115397-12116130 28 3.6
10_08_0221 - 15980370-15980927 28 4.7
07_03_0560 + 19479597-19480667 28 4.7
02_05_0149 + 26290236-26290880 28 4.7
10_08_0222 - 15983756-15984313 27 6.3
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 27 6.3
06_03_1038 + 27072405-27072407,27073306-27073501,27073674-270737... 27 6.3
05_06_0078 - 25412770-25413852 27 6.3
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 27 6.3
04_03_0413 + 15612568-15613005 27 6.3
01_06_0509 - 29921224-29924589 27 6.3
01_02_0081 + 10943368-10943787 27 6.3
12_01_0841 - 7873458-7874225 27 8.3
10_08_0220 - 15977247-15977804 27 8.3
10_08_0217 - 15962192-15962884 27 8.3
08_02_0826 - 21583507-21583555,21584000-21584679 27 8.3
06_03_0849 - 25344261-25344416,25344652-25344808,25344917-253450... 27 8.3
06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652 27 8.3
06_01_0962 - 7407829-7408025,7408219-7408279 27 8.3
03_02_0475 + 8760948-8760987,8761043-8761181,8761268-8761358,876... 27 8.3
02_02_0444 + 10340927-10341063,10341157-10341241,10341480-103415... 27 8.3
01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665... 27 8.3
>08_01_0229 + 1834102-1834358,1834442-1834901
Length = 238
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 262 LGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGD 423
L G +A+R D L G G +S + + + VGD G+G G VG+
Sbjct: 85 LRGRAVAERRDDDGLKWGGGEDAVSATRWGRTAMGDAVEEVGDGGTGVDGVVGE 138
>03_06_0218 - 32442904-32443347,32444426-32444626,32446584-32447156
Length = 405
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +1
Query: 328 GMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
G S HW A C S + G G GA G G GGGY
Sbjct: 116 GDSCHW-ARECPQSVPATGGGGGGGAFGGSGGGGGGY 151
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1
Query: 307 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
AGG G E+ +S G TS NG G G G GG Y
Sbjct: 344 AGGGSASGAGENIDTVSTGYGGSTSAAGNGGG--GGGGQAGGSY 385
>10_08_0223 - 15986763-15987575
Length = 270
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 307 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVT 444
AGG G G + S G+ + +G+G GS G GGGY +
Sbjct: 191 AGGGGGGGGGHGGGPAASPSYGVGAGAGSGAGDAGSDGSSGGGYAS 236
>10_08_0242 - 16120554-16121129
Length = 191
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 268 GMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITS------VGDNGSGAIGSVGDHG 429
G+ A R+ +S A GSG G E +++ +G+ S G NG+ A G G G
Sbjct: 18 GLASAVRVERYSNAQGSGT-GSGEGTGSVNGAGAGLGSGTGSGRSGYNGAHASGGGGGGG 76
Query: 430 GGY 438
GGY
Sbjct: 77 GGY 79
>10_08_0236 + 16078162-16078731
Length = 189
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +1
Query: 298 HSLAGGSGVRGMSEHWSAISCVSSG-----ITSVGDNGSGAIGSVGDHGGG 435
H+ AGGSG G S + S SG +S NG G G D GGG
Sbjct: 67 HATAGGSGGGGGSSQYGG-SAYGSGNGSGSSSSQTSNGEGGYGGESDAGGG 116
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 313 GSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGG 435
GSG + +W S + + G NG+G G G GG
Sbjct: 140 GSGYSNANNNWYGSSAGAGASGNGGGNGNGENGGNGSGAGG 180
>07_03_0923 -
22617627-22617860,22618486-22618542,22618612-22618768,
22618875-22619014,22619642-22619777,22619874-22620142,
22620272-22620492,22620648-22620707,22620859-22620915,
22621008-22621405,22621929-22622000,22622098-22622169,
22622246-22622317,22622574-22622645,22622738-22622867,
22623065-22623170
Length = 750
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 334 SEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVT 444
+E W + CV S ITS+ N + G +G+ G + +
Sbjct: 63 NEGWQGVECVVSNITSITLNAANLGGQLGNTLGNFTS 99
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +1
Query: 304 LAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVTDXLLG 459
+ GG G G + + G +G G G G G GGG+ ++G
Sbjct: 177 IGGGGGKGGGFGAGGGVGGAAGGGGGMGSGGGGGFGGGGGKGGGFGAGGVMG 228
>02_05_0059 - 25482207-25482271,25482432-25482651
Length = 94
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 253 RRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGG 432
RR GG Q++ D GG ++G + S G ++ G G G++G G++GG
Sbjct: 19 RRRRGG---GQQVND---GGGGSMKGGGDSGSLARGGDGGGSTWGGGGGGSVGRGGNNGG 72
Query: 433 G 435
G
Sbjct: 73 G 73
>06_01_0732 + 5397217-5397327,5399010-5399831
Length = 310
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +1
Query: 307 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGG 435
A G+GV +S W A S SS +G G GA G+V GGG
Sbjct: 210 AYGAGV-DVSALWRASSSSSSSPPMMGSGGGGAFGTVA--GGG 249
>04_01_0352 -
4619946-4619984,4620062-4620133,4621515-4621880,
4622240-4622713
Length = 316
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 250 QRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGIT 378
+ R + G +A+ LR AGG GVR + H + + C SG T
Sbjct: 195 EERAVAGGAVAE-LRPGGRAGGGGVRVRARHRAGVPCPLSGQT 236
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 307 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
AG SG + +A++ + G V G G G G HGG +
Sbjct: 121 AGASGYGALLAGGAAVAAAAVGAHMVRPGGGGGHGMFGHHGGKF 164
>11_04_0008 + 12115147-12115354,12115397-12116130
Length = 313
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 253 RRDLGGMGLAQRLRDHSLAGGSGV 324
+R+ G +GLA LR +LAGG GV
Sbjct: 188 QREPGAVGLALSLRASALAGGGGV 211
>10_08_0221 - 15980370-15980927
Length = 185
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +1
Query: 268 GMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
G G Q D S A G G G SG S +G G G G +GGGY
Sbjct: 53 GSGYGQASGDGSYASGDGGGGGG---GGGQNGGSGYGSGSGSGYGQAGGYGPYGGGY 106
>07_03_0560 + 19479597-19480667
Length = 356
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 304 LAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
L GG G G + + G +G G G G G GGG+
Sbjct: 182 LGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGF 226
>02_05_0149 + 26290236-26290880
Length = 214
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 394 GSGAIGSVGDHGGGY 438
GSG IG G++GGGY
Sbjct: 148 GSGGIGGYGNYGGGY 162
>10_08_0222 - 15983756-15984313
Length = 185
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 367 SGITSVGDNGSGAIGSVGDHGGGY 438
SG S +GSG G G +GGGY
Sbjct: 126 SGSGSGSGSGSGQAGGYGPYGGGY 149
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 367 SGITSVGDNGSGAIGSVGDHGGGY 438
SG S +G G GS G +GGGY
Sbjct: 85 SGYGSGSGSGYGQAGSYGPYGGGY 108
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 364 SSGITSVGDNGSGAIGSVGDHGGG 435
S G+ G GSG +G G GGG
Sbjct: 22 SVGLAGAGGGGSGGVGGGGGGGGG 45
>06_03_1038 +
27072405-27072407,27073306-27073501,27073674-27073750,
27073945-27073999,27074310-27074370,27074482-27074554,
27074948-27075538
Length = 351
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 333 HAAYAAPASKTVVSQSLSQSHPAQIAPLLAYAGHGLDYAH 214
HA Y + S+ V+ S S P+ L Y G LD+ H
Sbjct: 192 HAGYKSLGSQAVLDIGSSMSFPSLQDDLQLYGGSHLDHLH 231
>05_06_0078 - 25412770-25413852
Length = 360
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 364 SSGITSVGDNGSGAIGSVGDHGGGYVT 444
S+GIT VG G G G GD GG +T
Sbjct: 223 STGITGVGGGGGGISG--GDGDGGCIT 247
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 358 CVSSGITSVGDNGSGAIGSVGD 423
C +G S GSG +GSVGD
Sbjct: 55 CRDAGCASSSGRGSGVVGSVGD 76
>04_03_0413 + 15612568-15613005
Length = 145
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 265 GGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGG 435
GG +A+R R ++ G GV + E ++ ++G G G G G G G G
Sbjct: 30 GGEAVAKRSRRSAVVGDPGVGEVGEVDGRMAERTTGGEGSGGGGGGEGGDGGREGSG 86
>01_06_0509 - 29921224-29924589
Length = 1121
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 265 GGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGG 435
GG +L+ L+G + +RG +A++ G+ ++ +G A+G+ GGG
Sbjct: 111 GGARCGSKLQALDLSGNAALRGSVADVAALASACGGLKTLNLSGD-AVGAAKVGGGG 166
>01_02_0081 + 10943368-10943787
Length = 139
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 334 SEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVT 444
S W A + + + GD +G G VG+ GG T
Sbjct: 6 SAAWWARTAMGDAVEEAGDGSAGVDGVVGERRGGGAT 42
>12_01_0841 - 7873458-7874225
Length = 255
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 310 GGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
GG G G E + S G G G G G G G GY
Sbjct: 47 GGGGGSGYGEGYGQGGGASGGGYGQGGGGGGGGGQGGGSGSGY 89
>10_08_0220 - 15977247-15977804
Length = 185
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +1
Query: 268 GMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
G G Q D S A G G G SG S +G G G G +GGGY
Sbjct: 53 GSGYGQAGGDGSYASGGGEGGGG---GGGENGGSGYGSGSGSGYGQAGGSGPYGGGY 106
>10_08_0217 - 15962192-15962884
Length = 230
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 367 SGITSVGDNGSGAIGSVGDHGGGY 438
SG S +G G GS G +GGGY
Sbjct: 168 SGYGSGSGSGYGQAGSYGPYGGGY 191
>08_02_0826 - 21583507-21583555,21584000-21584679
Length = 242
Score = 27.1 bits (57), Expect = 8.3
Identities = 21/58 (36%), Positives = 23/58 (39%)
Frame = +1
Query: 265 GGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 438
GG G R S AG +G G S S SS + G NG GA G G Y
Sbjct: 139 GGAGSYAGSRAGSYAGSNGGDGGSGAGSYAG--SSAGSYAGSNGGGAGSYAGSEAGSY 194
>06_03_0849 -
25344261-25344416,25344652-25344808,25344917-25345056,
25345160-25345295,25345392-25345663,25345809-25346068,
25346716-25347035,25347287-25347352,25347439-25347510,
25347609-25347680,25347776-25347858,25348068-25348139,
25348389-25348485,25348918-25349050,25349158-25349236
Length = 704
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 307 AGGSGVRGMSEHWSAISCVSSGITSVGDNG 396
AGG G + W +SCV S +TS+ + G
Sbjct: 48 AGGGDPCGAA--WMGVSCVGSAVTSISEFG 75
>06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652
Length = 327
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 292 RDHSLAGGSGVRGMSEHWSAISCVSSGITSV 384
+ +S AG S + M+ H SAI V S +TSV
Sbjct: 78 QQNSGAGFSSTKRMTSHMSAIVVVKSTVTSV 108
>06_01_0962 - 7407829-7408025,7408219-7408279
Length = 85
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 LGGM-GLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVG 387
+GGM G +R + G V G S + S+I CV G SVG
Sbjct: 36 IGGMRGGIAGVRGNVSGGRGDVNGHSHNISSIICVGGGRDSVG 78
>03_02_0475 +
8760948-8760987,8761043-8761181,8761268-8761358,
8761436-8761499,8762837-8762942,8763018-8763072,
8764377-8764430,8765223-8765312,8765462-8765518
Length = 231
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 289 LRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVT 444
L + S A + + W +SC S TS+ SGA+ V +G VT
Sbjct: 29 LLEDSAAAAAASPAPAPVWPGLSCFSRVATSLRGGWSGALNKVEHYGVQRVT 80
>02_02_0444 +
10340927-10341063,10341157-10341241,10341480-10341537,
10343738-10345885,10345943-10346388
Length = 957
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 310 GGSGVRGMSEHWSAISCVSSGITSVG-DNGSGAIGSVGDHGGGYVTD 447
GG + G E C+ G T G D G +G D GGG++ D
Sbjct: 226 GGELLGGGLEEGGGGGCLYDGATVGGLDGGGDVVGGGLDGGGGWLYD 272
>01_06_0903 +
32862551-32864752,32865341-32865535,32866219-32866523,
32866664-32866849,32867137-32867314,32867548-32867574
Length = 1030
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 268 GMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAI 408
G+G QRL +L G G+ G E W S S I S D G I
Sbjct: 353 GLGSVQRLVREALDGREGLEGTLEQWLK-SVFGSEIESPWDQIRGLI 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,767,432
Number of Sequences: 37544
Number of extensions: 152350
Number of successful extensions: 1105
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -