Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_G24
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 196 2e-51
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.076
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 30 0.40
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 0.71
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 2.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.0
SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 5.0
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 26 6.6
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 6.6
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 8.7
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 196 bits (479), Expect = 2e-51
Identities = 98/197 (49%), Positives = 133/197 (67%), Gaps = 3/197 (1%)
Frame = -2
Query: 747 ELVPVPVPQKRGAP-VIFAEDEEYXRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXX 571
E+VPV VP RG P + EDEE +N +K + VF K NGTVTA NASTLNDG
Sbjct: 200 EIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVF-KSNGTVTAANASTLNDGASA 258
Query: 570 XXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEI 391
K L +KP+A+I+G+ + DP F +P++AIPK L+ G+ V +EI
Sbjct: 259 LVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALKHAGIEASQVDYYEI 318
Query: 390 NEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVA 217
NEAFSVVAVAN K+LGLDP ++N++GG V++GHP+G SG+RI+ L + L K + GVA
Sbjct: 319 NEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTLAYILAQKDAKIGVA 378
Query: 216 SICNGGGGASSVMIEKM 166
++CNGGGGASS++IE++
Sbjct: 379 AVCNGGGGASSIVIERV 395
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.3 bits (70), Expect = 0.076
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Frame = +2
Query: 362 ATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGLTFNL 541
+T++T +S S ATS+ TP+ S N AT+ + +S SA + N
Sbjct: 337 STSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANS 396
Query: 542 LAASAVINTKAAAPSFNVEA-LPAVTV---PFSFWN-TVDNFVNFSKLTLXYSSSSANIT 706
+++V +T APS+N + LP +V P S N T + + L+ S+++ + +
Sbjct: 397 TTSTSVSST---APSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSAS 453
Query: 707 GAPL-FCGTGTGTSSS 751
PL + T TS+S
Sbjct: 454 STPLSSVNSTTATSAS 469
Score = 31.9 bits (69), Expect = 0.10
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Frame = +2
Query: 305 TAPPCTLIFDGSNPNNF*FATATTLKASFISHNATSSFL--TPVFSNNLGMA--TAGAIG 472
+A P + S+ + A+++T +S S + TSS L + + S++L + T+ ++
Sbjct: 101 SASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLA 160
Query: 473 KSMGSHSPSANPTIRAIGLTFNLLAAS-AVINTKAAAPSFNVEALPAVTVPFSFWNTVDN 649
S + + SA PT A + + AAS + ++ A+ S N T N
Sbjct: 161 SSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASN 220
Query: 650 FVNFSKLTLXYSSSSANITGAPLFCGTGTGTSSS 751
S L SSS + T A + + T SS
Sbjct: 221 SATSSSLA---SSSLNSTTSATATSSSISSTVSS 251
Score = 30.3 bits (65), Expect = 0.31
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Frame = +2
Query: 359 FATATTLKASFISHNATSSFLTP---VFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGL 529
+ T++ +S S +A SS LT + S++ T+ + S + S + + ++ +
Sbjct: 65 YNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSST 124
Query: 530 TFNLLAASAVINTKAAAPSFNVEALPAV-TVPFSFWNTVDNFVNFSKLTLXYSSSSANIT 706
T + LA+S++ ++ A+ S +L + T S ++ N + T +SSS + T
Sbjct: 125 TSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSST 184
Query: 707 GAPLFCGTGTGTSSS 751
A + + SSS
Sbjct: 185 AASNSATSSSLASSS 199
Score = 28.7 bits (61), Expect = 0.94
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 362 ATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGLTFNL 541
AT+++L ++ S++ATSS L N+ ATA + S + S SA + +L
Sbjct: 176 ATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSS--------SL 227
Query: 542 LAASAVINTKAAAPSFNVEALPAVTVPFSFWN--TVDNFVNFSKLTLXYSSSSANITGAP 715
++S T A A S ++ + + + P + N T + + + Y++SS + P
Sbjct: 228 ASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTP 287
Score = 26.2 bits (55), Expect = 5.0
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Frame = +2
Query: 362 ATATTLKASFISHNATSSFLTPVFSNNLGMATA---------GAIGKSMGSHSP--SANP 508
A++T L +S S ATS+ TP+ S N AT+ + + S +P S N
Sbjct: 436 ASSTPL-SSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNS 494
Query: 509 TIRAIGLTFNLLAASAVINT--KAAAPSFNVEA-LPAVTV---PFSFWN-TVDNFVNFSK 667
T + L +A++ +T + APS+N + LP +V P S N T + +
Sbjct: 495 TSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTP 554
Query: 668 LTLXYSSSSANITGAPLFCGTGTGTSSS 751
LT S+++ + + P G T TSS+
Sbjct: 555 LTSVNSTTATSASSTPF--GNSTITSSA 580
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 450 IPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSL 298
+ KL +TG + ++L ++NE S KL DPS++ + G V L
Sbjct: 628 LTKLNYETGKTENRLSLLQLNEQLSCSPADRAKLTLFDPSRLLIFKGVVKL 678
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 347 NNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSH 490
N F F TA A N S LTPVFS + MA+A A ++ +H
Sbjct: 259 NQFSFNTAANPFAFAKKENEESKPLTPVFSFSTTMASADASKETKQTH 306
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 369 AVANQKLLGLD-PSKINVHGGAVSLGHPIGMSGARIVVHLCHALK 238
+++++ LL +D P+ + + G L + S A + VH+CHA+K
Sbjct: 194 SMSSRSLLIMDIPTTMRSNNGLSILASRLKSSEAPMHVHICHAIK 238
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 2.2
Identities = 29/143 (20%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Frame = +2
Query: 326 IFDGSNPNNF*FATATTLKASFISHNATSSF-LTPVFSNNLGMATAGAIGKSMGSHSPSA 502
+ D S+ ++ ++T+++ S S + +SS LT ++L +T+ + S+ S S S
Sbjct: 138 LLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSS-QPSVSSTSSST 196
Query: 503 NPTIRAIGLTFNLLAASAVINTKAAAPSFNVEALPAVTVPFSFWNTVDNFVNFSKLTLXY 682
+ + + L++S+V+++ ++ S + L + ++ S + + + + +L
Sbjct: 197 FSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSS 256
Query: 683 SSSSANITGAPLFCGTGTGTSSS 751
SSSS+ + + + +SSS
Sbjct: 257 SSSSSTASSSSSSSSIISSSSSS 279
Score = 26.2 bits (55), Expect = 5.0
Identities = 24/130 (18%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +2
Query: 365 TATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSANPTIRAIGLTFNLL 544
+ +++ ++ S ++TSS L+ S++ +++ + S S S++PT + ++ +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 545 AASAVINTKAAAPSFNVEALP-AVTVPFSFWNTVDNFVNFSKLTLXYSSSSANITGAPLF 721
++S+ +T + S + + + T+ S ++ +F + + SSS++ + F
Sbjct: 296 SSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSF 355
Query: 722 CGTGTGTSSS 751
T + + SS
Sbjct: 356 SSTTSSSKSS 365
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +2
Query: 326 IFDGSNPNNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSAN 505
I+ ++ ++ +TAT +S S +++SS TP+ S+++ + + + S+ S S S++
Sbjct: 133 IYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPI-SSSITSSISSSASSSVSSSSASSS 191
Query: 506 PTI 514
+I
Sbjct: 192 GSI 194
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 5.0
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 2/188 (1%)
Frame = +2
Query: 194 PPPPLQIEATPFSPFFKAWHRCTTMRAPDIPIG*PKLTAPPCTLIFDGSNPNNF*FATAT 373
PP T SP CTT + IP G + P T ++ ++ T+
Sbjct: 208 PPTSTSSTDTNSSPLPTTSTSCTT--STSIPTGGSSSLSTPITPTVPPTSTSS----TSI 261
Query: 374 TLKASFISHNATSSFLTPVFSNNLGMATA-GAIGKSMGSHSPSANPTIRAIGLTFNLLAA 550
+ + S T+S P S + +T+ G S +P+ PT + T A+
Sbjct: 262 PIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 321
Query: 551 SAVINTKAAA-PSFNVEALPAVTVPFSFWNTVDNFVNFSKLTLXYSSSSANITGAPLFCG 727
++ T ++ PS + + ++P N T+ +S+S+ T P
Sbjct: 322 TSSTGTSSSPLPSTSTSCTTSTSIP-----PTGNSTTPVTPTVPPTSTSSTSTPPPPAST 376
Query: 728 TGTGTSSS 751
+ TGTSSS
Sbjct: 377 SSTGTSSS 384
>SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 705 VIFAEDEEYXRVNFEKFTKLSTVFQKENGTVTAGNASTLNDG 580
+IF+ED+E ++F++F S + N + AS L G
Sbjct: 445 LIFSEDKEQSSISFQEFVSFSPLSSTLNFALFHQAASKLKTG 486
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 291 PIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 172
P G+SG I+V LC A E +I G G +S+ IE
Sbjct: 229 PKGLSGKDIIVSLCGAFNHDEVLNHAIEFYGEGLNSLSIE 268
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 206 LQIEATPFSPFFKAWH-RCTTMRAPDIPIG*PKLTAPPCTLIFDGSNPNNF 355
L +E +P PF+K WH R T+ ++ P+ + +F G NP +F
Sbjct: 285 LPLELSPGCPFYKIWHIRNTSCQSWPSPL---YVKFNGGDKLFPGDNPYSF 332
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 284 PIG*PKLTAPP-CTLIFDGSNPNNF*FATATTLKASFISHNATSSFLTPVFSNNLGMATA 460
P P PP C + SNP ATA + H + + +TP NN TA
Sbjct: 207 PYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINN---HTA 263
Query: 461 GAIGKSMGSHSPSANPTIR 517
+ ++ P PT +
Sbjct: 264 VPLSPTLAVWLPMTQPTFQ 282
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,967,198
Number of Sequences: 5004
Number of extensions: 59799
Number of successful extensions: 193
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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