Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_G11
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615... 124 4e-29
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 124 4e-29
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 118 3e-27
08_01_0778 + 7548307-7549220,7551682-7552021 29 1.1
06_03_0860 + 25484826-25485758,25486155-25486406 29 1.1
05_06_0099 + 25572530-25573603,25574178-25574633,25575165-25575449 29 1.5
04_04_1097 - 30859963-30860302,30862130-30863058 29 2.0
07_03_1086 + 23858419-23859423,23859527-23859610 28 2.7
01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951 27 4.6
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 27 6.1
12_02_1112 + 26162188-26162877,26163263-26163634 27 8.1
>07_03_1260 -
25260872-25261101,25261199-25261312,25261473-25261596,
25261755-25261839,25261917-25262033,25262122-25262207
Length = 251
Score = 124 bits (298), Expect = 4e-29
Identities = 67/131 (51%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Frame = -2
Query: 400 DDDVDLFGXXXXXXXXXXXXXXXERLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAA 221
DDDVDLFG R AA A KK KS+++LDVKPWDDETDM
Sbjct: 105 DDDVDLFGEETEEEKKAAEE----RAAAVKASGKKKES--GKSSVLLDVKPWDDETDMTK 158
Query: 220 LEQAVRSISTDGLLWGAAKLVPLAYGIHKLQISCVVEDDKVSIDWLTEE---IEKNEDYV 50
LE+AVR++ +GLLWGA+KLVP+ YGI KLQI + DD VS+D L E+ E +Y+
Sbjct: 159 LEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYI 218
Query: 49 QSVDIAAFNKV 17
QS DI AFNK+
Sbjct: 219 QSCDIVAFNKI 229
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 124 bits (298), Expect = 4e-29
Identities = 67/131 (51%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = -2
Query: 400 DDDVDLFGXXXXXXXXXXXXXXXERLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAA 221
DDDVDLFG R AA A KK KS+++LDVKPWDDETDMA
Sbjct: 121 DDDVDLFGEETEEEKKAAEE----RAAAVKASGKKKES--GKSSVLLDVKPWDDETDMAK 174
Query: 220 LEQAVRSISTDGLLWGAAKLVPLAYGIHKLQISCVVEDDKVSIDWLTEE---IEKNEDYV 50
LE+AVR++ +GLLWGA+KLVP+ YGI KLQI + DD VS+D L E+ E +++
Sbjct: 175 LEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFI 234
Query: 49 QSVDIAAFNKV 17
QS DI AFNK+
Sbjct: 235 QSCDIVAFNKI 245
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 118 bits (283), Expect = 3e-27
Identities = 66/131 (50%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Frame = -2
Query: 400 DDDVDLFGXXXXXXXXXXXXXXXERLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAA 221
DDD+DLFG AA A KK KS+++LDVKPWDDETDM
Sbjct: 101 DDDLDLFGDETEEDKKAADER-----AASKASSKKKES--GKSSVLLDVKPWDDETDMKK 153
Query: 220 LEQAVRSISTDGLLWGAAKLVPLAYGIHKLQISCVVEDDKVSIDWLTEE---IEKNEDYV 50
LE+AVRS+ +GL WGA+KLVP+ YGI KLQI + DD VS+D L EE E ++V
Sbjct: 154 LEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFV 213
Query: 49 QSVDIAAFNKV 17
QS DI AFNK+
Sbjct: 214 QSCDIVAFNKI 224
>08_01_0778 + 7548307-7549220,7551682-7552021
Length = 417
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -2
Query: 205 RSISTDGLLWGAAKLVPLA-YGIHKLQISCV-VEDDKVSIDWLTEEIEKNEDYVQSVDIA 32
R + +D LL K + +A +G+ ++++ + + + W+ E+ ++ Y Q VD+
Sbjct: 261 RDLKSDNLLISGDKSIKIADFGVARIEVKTEGMTPETGTYRWMAPEVIQHRPYDQKVDVY 320
Query: 31 AFNKV 17
+F V
Sbjct: 321 SFGIV 325
>06_03_0860 + 25484826-25485758,25486155-25486406
Length = 394
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 205 RSISTDGLLWGAAKLVPLA-YGIHKLQISC-VVEDDKVSIDWLTEEIEKNEDYVQSVDIA 32
R + + LL V +A +G L+ +C + +K + W+ E+ K + Y + VD+
Sbjct: 221 RDLKSQNLLLNDEMRVKVADFGTSCLETACQATKGNKGTYRWMAPEMTKEKPYTRKVDVY 280
Query: 31 AFNKV 17
+F V
Sbjct: 281 SFGIV 285
>05_06_0099 + 25572530-25573603,25574178-25574633,25575165-25575449
Length = 604
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 205 RSISTDGLLW-GAAKLVPLAYGIHKLQISC-VVEDDKVSIDWLTEEIEKNEDYVQSVDIA 32
R + + +L+ G + +G+ ++ C +EDD + W+ E+ K + Y + VD+
Sbjct: 420 RDVKPENILFDGECCAKVVDFGVACEEVYCNSLEDDPGTYRWMAPEMYKRKPYGRKVDVY 479
Query: 31 AFNKV 17
+F V
Sbjct: 480 SFGLV 484
>04_04_1097 - 30859963-30860302,30862130-30863058
Length = 422
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -2
Query: 205 RSISTDGLLWGAAKLVPLA-YGIHKLQISCV-VEDDKVSIDWLTEEIEKNEDYVQSVDIA 32
R + +D LL K + +A +G+ ++++ + + + W+ E+ ++ Y Q VD+
Sbjct: 266 RDLKSDNLLISGDKSIKIADFGVARIEVKTEGMTPETGTYRWMAPEMIQHRPYDQKVDVY 325
Query: 31 AFNKV 17
+F V
Sbjct: 326 SFGIV 330
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 151 AYGIHKLQISCVVEDDKVSIDWLTEEIEKNEDYVQSVDIAA 29
A GIH+L +SC E +I L E+E + S+ AA
Sbjct: 44 AAGIHRLLLSCAAEASDGTISSLVAELESPSSSLDSLRRAA 84
>01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951
Length = 563
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -2
Query: 205 RSISTDGLLWGAAKLVPLA-YGIHKLQISC-VVEDDKVSIDWLTEEIEKNEDYVQSVDIA 32
R I + +L+ V +A +GI + C V+ +D+ + W+ E+ K + Y + VD+
Sbjct: 393 RDIKPENILFDENFCVKIADFGIACEESMCDVLVEDEGTYRWMAPEMIKRKAYNRKVDVY 452
Query: 31 AF 26
+F
Sbjct: 453 SF 454
>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
901912-902016,902245-902391,903273-903354,903445-903786,
903873-904177,904259-904435,904799-904852,905171-905254,
905855-905968,906048-906321,907552-907926,908003-908267,
908352-908538,908615-909052,909895-909966,910037-910630,
911471-911623,911700-911828,912326-912657,912705-912840,
913046-913491,913580-915087,915169-915431,915622-915738,
915844-916014,916743-916845,916930-916988,918360-918461,
918560-918649,918727-918877,919745-919830,919926-920102,
920915-920978,921859-922008,923132-923211,923311-923376,
924540-924747,925502-925575,925761-925848,926140-926312,
926541-926609,926698-926741,927074-927167,927290-927366,
927475-927552,927992-928085
Length = 3314
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -3
Query: 159 CLWLMVSISCKFPVL-LKMIRFLL 91
CL LMV + CK PV+ L+MI LL
Sbjct: 1561 CLGLMVLVQCKLPVITLQMIFDLL 1584
>12_02_1112 + 26162188-26162877,26163263-26163634
Length = 353
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = -2
Query: 280 AKSNIILDVKPWDDETDMAALEQAVRSISTDGL--LWGA-----AKLVPLAYGIHKLQIS 122
A S + + +DD+ D + L + S S+DG+ +W A K PLA K +++
Sbjct: 260 AHSTRVKGIVVFDDKNDGSELCNLIASASSDGIIRIWDARMIAKEKTTPLAEANTKARLT 319
Query: 121 CV 116
C+
Sbjct: 320 CL 321
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,363,714
Number of Sequences: 37544
Number of extensions: 168703
Number of successful extensions: 457
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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