Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_G09
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0246 + 28634530-28634735,28634841-28634901,28634996-286350...    94   1e-19
03_05_0545 + 25419031-25420758                                         31   1.6  
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045...    30   2.8  
06_02_0068 + 11107493-11107653,11109116-11109218,11109311-111094...    29   4.9  

>05_07_0246 +
           28634530-28634735,28634841-28634901,28634996-28635088,
           28635326-28635391,28635506-28635576,28636225-28636329,
           28637065-28637134
          Length = 223

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 24/141 (17%)
 Frame = -3

Query: 879 KTMVSHIYIYTDYKLDESYTPSRISIRAGTHFNDLQE----------------------I 766
           K  +  + +Y D+KLDESYTPS+IS+RAG  F++L+E                      I
Sbjct: 85  KVQLQLVVVYVDFKLDESYTPSKISVRAGDGFHNLKEYIDIRLGRTGKLWQDFVSVNMEI 144

Query: 765 EVIELIEPSGWEMIPIKDIHDRP--IRTYMIQIAVLSNHQNGRDTHMRQIKVHSPCEPTS 592
           + +EL +P GW  I +     R   I T+M+QI+VLSNH NGRDTH+RQIK++ P  P  
Sbjct: 145 KTVELSKPVGWVHISLSGADPRETFIHTFMLQISVLSNHLNGRDTHIRQIKIYGP-RPNH 203

Query: 591 FDINKFRNFSTVQFQQYATIR 529
                F +F++ +F  Y+T+R
Sbjct: 204 VPHQPF-HFTSREFVTYSTVR 223


>03_05_0545 + 25419031-25420758
          Length = 575

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -1

Query: 521 IYFCLLKECTLGGLSIIRPYCNFITKSFVSIFVIYLFSYEQLLFRNNCCKE 369
           I F LL  C+L  + +      +++ SFVS++V Y+     L++ ++CC E
Sbjct: 230 ICFLLLALCSLLAILVTGTVTVWVSASFVSLYVAYVL----LVWTSHCCSE 276


>05_06_0104 -
           25603568-25603867,25603965-25604162,25604247-25604526,
           25604615-25605419,25605518-25606673
          Length = 912

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 205 KMLNEIVNLAIFDPLFHKKLRKL 137
           ++LN +  + IFDPL H++LRK+
Sbjct: 755 ELLNRLDEIVIFDPLSHEQLRKV 777


>06_02_0068 + 11107493-11107653,11109116-11109218,11109311-11109423,
            11109502-11109624,11110165-11110266,11110367-11110532,
            11111215-11111331,11111438-11111478,11111735-11111836,
            11111924-11112140,11112271-11112498,11112580-11112707,
            11112804-11112921,11113020-11113235,11113314-11113463,
            11113553-11113629,11113973-11114190,11114443-11114656,
            11114744-11114823,11114898-11115015,11115092-11115262,
            11116124-11116292,11116404-11116447,11116620-11116662,
            11116743-11116888,11118337-11118431,11118579-11119477,
            11120540-11120638,11120907-11121002,11123447-11123568,
            11123675-11123767,11123922-11124114
          Length = 1653

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/91 (20%), Positives = 38/91 (41%)
 Frame = -3

Query: 792  THFNDLQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDTHMRQIKVH 613
            +HF    ++E   +IEP    +IP      +  R  ++  A L N      +   + + +
Sbjct: 901  SHFQ-AWKLESASIIEPPCNFIIPFHSQGKKRPRWALVDKAHLHNTWRSSQSSYHRYRTN 959

Query: 612  SPCEPTSFDINKFRNFSTVQFQQYATIR*YN 520
            +   P+S  +N   +   +    Y T+R Y+
Sbjct: 960  ADVSPSSLMVNLMNDLLDLSLHNYETVRSYS 990


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,237
Number of Sequences: 37544
Number of extensions: 338485
Number of successful extensions: 629
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)