Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_F21
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1264 + 35321972-35322448,35323022-35323252,35323903-353245...    30   1.9  
10_08_0743 + 20249478-20250021,20250673-20250740,20250923-20250964     29   4.5  
10_08_0044 + 14405899-14406183                                         28   7.8  
10_01_0133 + 1621574-1625779                                           28   7.8  

>02_05_1264 +
           35321972-35322448,35323022-35323252,35323903-35324565,
           35324698-35324806,35324965-35325383
          Length = 632

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 406 IWRLHDQDLPSLDRQEGVDTNWYF 335
           ++RL   DLPSL R    D  WYF
Sbjct: 53  LYRLEPWDLPSLSRIRSRDAQWYF 76


>10_08_0743 + 20249478-20250021,20250673-20250740,20250923-20250964
          Length = 217

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 232 PLERRPCITYLDCIIKGAVECEL 164
           P+ + P  TY +CI+ G  EC +
Sbjct: 116 PIGKNPMYTYRECIVLGETECSI 138


>10_08_0044 + 14405899-14406183
          Length = 94

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 412 GAIWRLHDQDLPSLDRQEGVDTN 344
           G+IWR  D D+ +  R+EG D N
Sbjct: 59  GSIWRGSDSDISAAKRREGDDEN 81


>10_01_0133 + 1621574-1625779
          Length = 1401

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 644 HFHVR*WIRSKIPFCILRMGVICLKNVSVSTI 549
           HFHVR W+   + F +LR+      N+  S +
Sbjct: 249 HFHVRIWVHVSLRFDVLRLTKEIFNNMVASEV 280


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,210,024
Number of Sequences: 37544
Number of extensions: 293717
Number of successful extensions: 538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)