Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_F21
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-6|AAA68338.1|  188|Caenorhabditis elegans Hypothetical pr...    72   4e-13
AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical ...    29   2.3  
AL023835-7|CAA19482.1|  175|Caenorhabditis elegans Hypothetical ...    29   3.0  
U41995-13|AAA83469.1|  223|Caenorhabditis elegans Hypothetical p...    29   4.0  
M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U80024-4|AAK18888.1|  436|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF047656-12|AAC05111.1|  168|Caenorhabditis elegans Hypothetical...    27   9.2  

>U28928-6|AAA68338.1|  188|Caenorhabditis elegans Hypothetical
           protein C44B7.7 protein.
          Length = 188

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 54/146 (36%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
 Frame = -3

Query: 499 NHQLDFIKYSEHWRGASATIIPTEHAHVWGAIWRLHDQDLPSLDRQEGVDTNWYFAKSVN 320
           N +L+F  YSE W+GA ATI   E   VWG +W++ ++   SLD QE      Y    V 
Sbjct: 55  NFRLEFANYSERWQGALATIKEAEGKEVWGCVWKMPNEYSDSLDEQE----FGYHRLMVP 110

Query: 319 VMTSDGVSVQCRTYQQTINPPLRKNGEELPLERRPCITYLDCIIKGAVECELPEYYIEEL 140
           V T  GV + CRTYQ +    L+ +    P+   P   Y   I +GA E +LP  YI++L
Sbjct: 111 VQTPKGV-ITCRTYQFS---DLKAD----PMAPSP--HYKLVITEGAKENKLPADYIQKL 160

Query: 139 KKIPHNGQIASA----KMLEKLNSXV 74
           + I  NG   +      +L KLN+ V
Sbjct: 161 EAIEDNGFAGAVDVDIPLLAKLNAKV 186



 Score = 33.1 bits (72), Expect = 0.19
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -1

Query: 606 FLYFAYGSNLFKKRIRINNPTAEFLGVGRLD 514
           F YFA+GSNL   RIR     AE+   G+LD
Sbjct: 24  FYYFAFGSNLLGDRIRYRQKGAEYDCNGKLD 54


>AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.5 protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = -3

Query: 382 LPSLDRQEGVDTNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEELPLERRPCITY 203
           +P   + +GVD  W+    +       V V       TI+ PL       P++R  CI Y
Sbjct: 51  MPPQPQYDGVDRGWFMTLDLLAALPLSVFVLTNYVPNTIDRPLLLTYLNDPVKRHLCIGY 110

Query: 202 LDCIIKGAV 176
           L   I+  +
Sbjct: 111 LPDSIRDPI 119


>AL023835-7|CAA19482.1|  175|Caenorhabditis elegans Hypothetical
           protein Y37A1B.7 protein.
          Length = 175

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 208 TYLDCIIKGAVECELPEYYIEELKKIP-HNGQIASAKMLEKL 86
           TY++  +K + EC+LP  ++  ++ IP  N  +     LEKL
Sbjct: 125 TYVNMYMKRSSECKLPIAHLSSIEMIPADNSSLKRRAKLEKL 166


>U41995-13|AAA83469.1|  223|Caenorhabditis elegans Hypothetical
           protein E02C12.12 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -3

Query: 211 ITYLDCIIKGAVECELPEYYIEELKKI---PHNGQIASAKMLEKLNSXVIFFTK 59
           +  L  I+K   E    E  + EL K+    HN ++A+ K+LEK+N   I +TK
Sbjct: 83  LAVLSKIMKLGGENGFSEEKLNELGKLIRDGHNREVATYKLLEKMNHPDIPYTK 136


>M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical
           protein B0303.4 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 352 DTNWYFAKSVNVMT-SDGVSVQCRTYQQTINPPLRKNGEELPLERRP 215
           D+ +  A ++ ++   D  S+  RTY+  + PP  ++G     E RP
Sbjct: 144 DSQYAAAAAIAILARGDDASLMSRTYRPQLRPPTERSGNTRVDESRP 190


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
            F21H12.6 protein.
          Length = 1374

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 445  TIIPTEHAHVWGAIWRLHDQDLPSLDRQEGVDTNWYFAKSVNVMTSDGVSV 293
            TI+PT  + + G    L D DL  +D+ E +    YF    +   + G+S+
Sbjct: 1019 TIVPTSGSFLAGTFSALKDSDLSDVDKSEVI----YFLSEYSTRPTKGLSM 1065


>U80024-4|AAK18888.1|  436|Caenorhabditis elegans Hypothetical
           protein C18B10.6 protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 154 YIEELKKIPHNGQIASAKMLEKLNSXVIFFTK 59
           Y+ ++ +  HN +I + K+LEK N   I +TK
Sbjct: 123 YLAKILRDAHNREIETYKLLEKFNHANIPYTK 154


>AF047656-12|AAC05111.1|  168|Caenorhabditis elegans Hypothetical
           protein F17E9.2 protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 327 DLAKYQFVSTPSCLSNDGKS 386
           D+ K+ F  T SC+SN G S
Sbjct: 21  DVTKFHFTGTLSCISNSGSS 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,224,416
Number of Sequences: 27780
Number of extensions: 291217
Number of successful extensions: 591
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)