Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_F12
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   3.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   8.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   8.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 VCYLYFFHKYLTLPVC 385
           VC+L FF  Y+ +P C
Sbjct: 338 VCWLPFFLMYVIVPFC 353


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 VCYLYFFHKYLTLPVC 385
           VC+L FF  Y+ +P C
Sbjct: 338 VCWLPFFLMYVIVPFC 353


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 209 P*SPHLAPTDFYFF 168
           P SP LAP+D++ F
Sbjct: 271 PYSPDLAPSDYFLF 284


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 VCYLYFFHKYLTLPVC 385
           VC+L FF  Y+ +P C
Sbjct: 338 VCWLPFFLMYVIVPFC 353


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 371 LSTCEKNTDNKHYLLGKENDMETEIDIANSND 276
           L TC++N++N     G  N   +  +  N+N+
Sbjct: 216 LETCQRNSNNSTITAGNANTNASNNNNNNNNN 247


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 356 KNTDNKHYLLGKENDMETEIDIANSNDE 273
           +N +N  + +GK+N     I+ +  NDE
Sbjct: 36  QNNNNDDWSVGKKNSNSGTINESEFNDE 63


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -2

Query: 67  GIKILPSCSQRCIDAMDTYL 8
           G+ ++P+C+ + +  +D Y+
Sbjct: 308 GVTMIPACTCKAVACLDPYV 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,801
Number of Sequences: 438
Number of extensions: 4157
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)