Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_F11
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 37 3e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 37 3e-04
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 34 0.001
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 29 0.056
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 26 0.39
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 25 0.69
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 4.9
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 6.4
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 6.4
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 6.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 8.5
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 36.7 bits (81), Expect = 3e-04
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 798 VSRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKALTTPAKCTDNPFFADCSLIVR 622
+++L I DSG Y C A NLY + VQ+ V+ P + A S+ V+
Sbjct: 869 IAQLQISSAEASDSGAYFCQASNLYGRDQQLVQLLVQEPPQPPNSLETAMVASRSINVK 927
Score = 29.9 bits (64), Expect = 0.032
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = -1
Query: 864 VYWSKDGV------RIASGDNIWISGXSVSRLTIRRVTVGDSGVYVCHADN 730
V W+ DG R G + + G +S + I V V D G Y C A+N
Sbjct: 453 VTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAEN 503
Score = 26.6 bits (56), Expect = 0.30
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 795 SRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKA 685
S L + VT+ D+G+Y C A N + +++ V A
Sbjct: 293 SVLALEAVTLEDNGIYRCSASNPGGEASAEIRLIVTA 329
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 765 GDSGVYVCHADN 730
GD+GVY C A N
Sbjct: 582 GDAGVYTCSARN 593
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 36.7 bits (81), Expect = 3e-04
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 798 VSRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKALTTPAKCTDNPFFADCSLIVR 622
+++L I DSG Y C A NLY + VQ+ V+ P + A S+ V+
Sbjct: 865 IAQLQISSAEASDSGAYFCQASNLYGRDQQLVQLLVQEPPQPPNSLETAMVASRSINVK 923
Score = 29.9 bits (64), Expect = 0.032
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = -1
Query: 864 VYWSKDGV------RIASGDNIWISGXSVSRLTIRRVTVGDSGVYVCHADN 730
V W+ DG R G + + G +S + I V V D G Y C A+N
Sbjct: 453 VTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAEN 503
Score = 26.6 bits (56), Expect = 0.30
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 795 SRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKA 685
S L + VT+ D+G+Y C A N + +++ V A
Sbjct: 293 SVLALEAVTLEDNGIYRCSASNPGGEASAEIRLIVTA 329
Score = 24.6 bits (51), Expect = 1.2
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 765 GDSGVYVCHADNLYSSHESSVQVTVKALTTPAKCTDNPFFADCSL 631
GD+GVY C A N H + V A+ P K +PF AD L
Sbjct: 582 GDAGVYTCSARN-KQGHSARRSGDV-AVIVPPKI--SPFTADRDL 622
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 34.3 bits (75), Expect = 0.001
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = -1
Query: 873 PENVYWSKDGVRIAS------GDNIWISGXSVSRLTIRRVTVGDSGVYVCHADNLYSSHE 712
PE + W DG R+++ G + ++G VS L I D G+Y C A + S E
Sbjct: 423 PE-ITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAE 481
Query: 711 SSVQVTVKAL 682
S ++ V L
Sbjct: 482 HSARLNVYGL 491
Score = 32.7 bits (71), Expect = 0.005
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 873 PENVYWSKDGVRIASGDNIWISGXS--VSRLTIRRVTVGDSGVYVCHADNLYSSHESSVQ 700
P N+ WS G + + + VS L I +T +G YVC A+N + S
Sbjct: 613 PLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAGEYVCTAENAAGTASHSTT 672
Query: 699 VTV 691
+TV
Sbjct: 673 LTV 675
Score = 25.8 bits (54), Expect = 0.52
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 789 LTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKA 685
L IR V DSG Y+C +N +TV A
Sbjct: 272 LIIREARVEDSGKYLCIVNNSVGGESVETVLTVTA 306
Score = 25.4 bits (53), Expect = 0.69
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -1
Query: 873 PENVYWSKDGVRIASGDNIWISGXSVSRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVT 694
PE V W G + S D + L I+ V D+G Y C+ +N + + Q+
Sbjct: 1306 PE-VTWKVRGAVLQSSDRL--RQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLI 1362
Query: 693 VKA 685
V A
Sbjct: 1363 VHA 1365
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 29.1 bits (62), Expect = 0.056
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = -1
Query: 873 PENVYWSKDGVRIASGD----NIWISGXSV--SRLTIRRVTVGDSGVYVCHADNLYS 721
PE + W KDG+ + + W G S++ I T D+G Y C ADN Y+
Sbjct: 52 PE-ITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAGYYECQADNQYA 107
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.2 bits (55), Expect = 0.39
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 795 SRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKALTTP-AKCTDNPFFA 643
++L I+ V D+G Y+C A ++ + V+ TP + + FF+
Sbjct: 457 TKLIIKNVDYADTGAYMCQASSIGGITRDISSLVVQEQPTPTTESEERRFFS 508
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -1
Query: 873 PENVYWSKDGVRIASGDNIWISGXSVSRLTIRRVTVGDSGVYVCHA---DNLYSSHESSV 703
P + W ++G + + + I + L + +V + +G Y CHA ++ +H ++
Sbjct: 339 PPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLTI 398
Query: 702 QVTVKALTTP 673
+ TP
Sbjct: 399 HTIPEVKVTP 408
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 193 DKQIIANQIFTGFFKIYSVS 252
D ++ N+ + F K+YSVS
Sbjct: 288 DGKLNVNEFYMAFSKLYSVS 307
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 25.4 bits (53), Expect = 0.69
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 401 NYIEKNNQYENNIIVTDGCLLTLTRDDNNSPKNYFLLVK 517
+YIE+NN I D +T+ R N P N +K
Sbjct: 45 DYIEENNMPNGMQIWNDKVFITIPRWKNGVPSNLNFFLK 83
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 404 YIEKNNQYENNIIVTDGCLL 463
+I KN++YE N I+T LL
Sbjct: 84 FINKNDKYEENTILTTMPLL 103
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 366 GTILLFSAINCVILKELYIRLSYE*HHMSTVC 271
G LL NCV+++E L+ +ST C
Sbjct: 604 GLFLLLDMFNCVVVEETIPSLNSTNVTLSTKC 635
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 126 IIYSLIYKWIFGSNIHK 176
+ Y L+ KWIFG ++ K
Sbjct: 94 VAYLLLGKWIFGIHLCK 110
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 126 IIYSLIYKWIFGSNIHK 176
+ Y L+ KWIFG ++ K
Sbjct: 94 VAYLLLGKWIFGIHLCK 110
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 126 IIYSLIYKWIFGSNIHK 176
+ Y L+ KWIFG ++ K
Sbjct: 94 VAYLLLGKWIFGIHLCK 110
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 8.5
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = -3
Query: 91 FVFSRFCLLI*IGIARFVVSVSFVIIK 11
F + CL++ I + ++ ++F+I++
Sbjct: 397 FGWQMICLIVVIALVSIIMYIAFIILQ 423
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,057
Number of Sequences: 438
Number of extensions: 4740
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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