Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_F07
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    36   0.039
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    36   0.039
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    31   1.1  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    31   1.1  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    31   1.1  
AC006695-7|AAM48553.1|  724|Caenorhabditis elegans Titin family ...    31   1.1  
AC006695-6|AAU45229.1|  703|Caenorhabditis elegans Titin family ...    31   1.1  
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ...    31   1.1  
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ...    31   1.1  
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ...    31   1.1  
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ...    31   1.1  
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ...    31   1.1  
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    30   1.5  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    30   1.5  
U50311-10|AAA92314.1|  135|Caenorhabditis elegans Inhibitor of s...    30   1.9  
U53141-8|AAA96110.3|  572|Caenorhabditis elegans Prion-like-(q/n...    29   3.4  
AC024765-8|AAF60530.1|  165|Caenorhabditis elegans Hypothetical ...    28   5.9  
AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -2

Query: 495 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 316
           VK D   +  C + C    + P+CA   GE   +F NEC M   +CE K  ++   QG C
Sbjct: 383 VKPDRTAECECPNRCEDV-MRPVCA-TNGE---TFDNECEMKKKSCETKSMIKVKHQGTC 437


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -2

Query: 495 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 316
           VK D   +  C + C    + P+CA   GE   +F NEC M   +CE K  ++   QG C
Sbjct: 391 VKPDRTAECECPNRCEDV-MRPVCA-TNGE---TFDNECEMKKKSCETKSMIKVKHQGTC 445


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
           protein.
          Length = 10578

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
           protein.
          Length = 18519

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
           protein.
          Length = 18534

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-7|AAM48553.1|  724|Caenorhabditis elegans Titin family
           protein 1, isoform a protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-6|AAU45229.1|  703|Caenorhabditis elegans Titin family
           protein 1, isoform b protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform g protein.
          Length = 1769

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform f protein.
          Length = 1769

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform e protein.
          Length = 1769

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform d protein.
          Length = 1769

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform c protein.
          Length = 1769

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 677 TTASTYLIRLTIGNLNELESSASWSTEFISFVPI*RPLF 561
           T A T+LIR +IG+ ++  +   WS+E  SFV +  P F
Sbjct: 55  TVAETHLIR-SIGSQSQSYTEEHWSSEITSFVALAPPKF 92


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/68 (27%), Positives = 26/68 (38%)
 Frame = -2

Query: 558 CAFAVLFVAVSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNEC 379
           C FA  F  +  +   L L ++       K C H+CT    DP+C          + N C
Sbjct: 85  CHFAQ-FQCIMKKSMGLSLTKLHMGRCSSKDCNHNCTNTEFDPVC----DTNGSVYRNLC 139

Query: 378 VMNNYNCE 355
           V     CE
Sbjct: 140 VFQMRRCE 147


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2

Query: 420 GKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS 289
           G TG K +   NEC+ NN  CEH + +  I    C    G  LS
Sbjct: 107 GFTGAKCQYDANECMANNGGCEH-ECVNTIGTYYCRCWPGFELS 149


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2

Query: 420 GKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS 289
           G TG K +   NEC+ NN  CEH + +  I    C    G  LS
Sbjct: 107 GFTGAKCQYDANECMANNGGCEH-ECVNTIGTYYCRCWPGFELS 149


>U50311-10|AAA92314.1|  135|Caenorhabditis elegans Inhibitor of
           serine protease likeprotein protein 2, isoform a
           protein.
          Length = 135

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 495 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 316
           + A A   K C  +    +    C  + G  PK+   +C+MN   C+ KD   + S G+C
Sbjct: 10  IVAVATATKTCEANEELVSCHNTCEPQCGYTPKACTEQCIMN--TCDCKDGFVRNSLGKC 67


>U53141-8|AAA96110.3|  572|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 13
           protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 450 CSHACRPSCAQHQPSPASGPAC 515
           C  AC PSC Q   +PA  P C
Sbjct: 178 CMPACLPSCVQSSCAPACQPMC 199



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 450 CSHACRPSCAQHQPSPASGPAC 515
           C  +C+PSC Q   +PA  P C
Sbjct: 225 CMPSCQPSCVQQACAPACQPMC 246


>AC024765-8|AAF60530.1|  165|Caenorhabditis elegans Hypothetical
           protein Y39A3CR.8 protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -2

Query: 612 KLVHRIHQFRSNMKTIIFCAFAVLFVAVSCRPDKL---DLKQVKADAERKK 469
           K +  +H+F  N+K  +     + FV+VS   DK    D+K++  DA++KK
Sbjct: 24  KSIIHLHRFSKNLKNKL----PIYFVSVSKGGDKKKKKDIKKIDKDADKKK 70


>AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical
           protein Y22F5A.2 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 191 SFICQYYEYNLSKAMLLVPTINNV 262
           SF C + + N S+ + +VP +NN+
Sbjct: 311 SFFCNFCQQNQSRTITIVPPVNNL 334


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,622,991
Number of Sequences: 27780
Number of extensions: 329714
Number of successful extensions: 963
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)