Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_E23
(533 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 177 5e-45
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 175 2e-44
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 175 2e-44
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 171 3e-43
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 163 1e-40
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 123 1e-28
08_02_0383 - 16539472-16539633,16543044-16543205 44 8e-05
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 36 0.016
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 3.1
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 27 7.2
11_06_0289 - 21969248-21973516 27 9.5
11_06_0185 + 21018045-21022307 27 9.5
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 27 9.5
08_01_1013 + 10251463-10251858,10252366-10252434,10252545-102526... 27 9.5
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 177 bits (431), Expect = 5e-45
Identities = 95/165 (57%), Positives = 112/165 (67%), Gaps = 16/165 (9%)
Frame = -2
Query: 451 MADQTEKAFQKQATVFLXRXGGMKRKDM-----RHHKNVGLGFXTPREAIEGTYIDKKCP 287
MA+QTE+AF KQ VFL K K R KN+GLGF TPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 286 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR-------FEKRHRXMSVHLS 128
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R +EKRH + H+S
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120
Query: 127 PCFRDVEIGDIVTIGECRPLSKTVRFNVLKV----SKGQGTRRIF 5
PCFR V+ GD V IG+CRPLSKTVRFNVLKV SK +++F
Sbjct: 121 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVF 164
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 175 bits (425), Expect = 2e-44
Identities = 92/153 (60%), Positives = 108/153 (70%), Gaps = 14/153 (9%)
Frame = -2
Query: 451 MADQTEKAFQKQATVFLX-RXGGMKRKD----MRHHKNVGLGFXTPREAIEGTYIDKKCP 287
MA+QTEKAF KQ VFL + G +K R K++GLGF TPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 286 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRXMSVH 134
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH + H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 133 LSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 35
+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 175 bits (425), Expect = 2e-44
Identities = 92/153 (60%), Positives = 108/153 (70%), Gaps = 14/153 (9%)
Frame = -2
Query: 451 MADQTEKAFQKQATVFLX-RXGGMKRKD----MRHHKNVGLGFXTPREAIEGTYIDKKCP 287
MA+QTEKAF KQ VFL + G +K R K++GLGF TPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 286 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRXMSVH 134
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH + H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 133 LSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 35
+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 171 bits (416), Expect = 3e-43
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = -2
Query: 367 RHHKNVGLGFXTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 188
R KN+GLGF TPREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH
Sbjct: 25 RFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLH 84
Query: 187 YLPKYNRFEKRHRXMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 35
++ KY R+EKRH + H+SPCFR V+ GD V IG+CRPLSKTVRFNV+KV
Sbjct: 85 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVIKV 134
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 163 bits (395), Expect = 1e-40
Identities = 92/168 (54%), Positives = 108/168 (64%), Gaps = 29/168 (17%)
Frame = -2
Query: 451 MADQTEKAFQKQATVFLX-RXGGMKRKD----MRHHKNVGLGFXTPREAIEGTYIDKKCP 287
MA+QTEKAF KQ VFL + G +K R K++GLGF TPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 286 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 170
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 169 ---RFEKRHRXMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 35
R+EKRH + H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 123 bits (296), Expect = 1e-28
Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Frame = -2
Query: 451 MADQTEKAFQKQATVFLX-RXGGMKRKD----MRHHKNVGLGFXTPREAIEGTYIDKKCP 287
MA+QTEKAF KQ VFL + G +K R K++GLGF TPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 286 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 167
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = -2
Query: 253 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRXMSVHLSPCFRDVEIGDIVTIGECR 74
+ G+V KMQ+++V+ D L + YNR+ KR H D IGD V + R
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61
Query: 73 PLSKTVRFNVLKV 35
PLSK + V ++
Sbjct: 62 PLSKRKHWVVAEI 74
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 36.3 bits (80), Expect = 0.016
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = -2
Query: 253 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRXMSVHLSPCFRDVEIGDIVTIGECR 74
LTG V K +T+ + L PKY R E+ + H P ++GD+V + R
Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029
Query: 73 PLSKTVRF 50
P+SKT F
Sbjct: 1030 PISKTKHF 1037
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 IEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 173
+ GT PFTG++S G + + KM + +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
>04_04_1571 +
34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 416 GHRFPXQXRWHEEEGHASP*ECWFRLQXSQRGD*GY 309
G + Q W E G +SP WF+L GD Y
Sbjct: 660 GWKCRNQVPWDPESGGSSPTAAWFKLFWQYIGDCSY 695
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 241 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRXMSVHLSPCFRDVE 107
++KM + T + +H LPK+ E LS CF +VE
Sbjct: 1251 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1295
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 241 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRXMSVHLSPCFRDVE 107
++KM + T + +H LPK+ E LS CF +VE
Sbjct: 1249 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1293
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 388 GMKRKDMRHHKNVGLGFXTPREAIEGTYIDKKCPFTGNVSIRGR 257
G ++RH ++G E T +DK+ P +G S+ GR
Sbjct: 121 GAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGR 164
>08_01_1013 +
10251463-10251858,10252366-10252434,10252545-10252652,
10253261-10253326,10254258-10254395,10255047-10255094,
10256292-10256398,10257228-10257302,10258317-10258368,
10258485-10259068,10259944-10260150,10260236-10260407
Length = 673
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -2
Query: 238 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRXMSVHLSPCFRDVEIGDIVTIGECRPLSKT 59
++++ + V+R +++ PK + M L PC+R E+ +I +PLS
Sbjct: 105 EEVEDEEDYVLREIDVYFTPKPFDEDTMLYVMQYPLRPCWRPYELNEICKEVRVKPLSSK 164
Query: 58 VRFNV 44
V ++
Sbjct: 165 VEVDL 169
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,770,660
Number of Sequences: 37544
Number of extensions: 264821
Number of successful extensions: 515
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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