Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_E15
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.63 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 464 EAESLLKGQPDGMFVLRPSSQSNHAYTLSVSCTGAVHNVGV 342
           +A  LLK + +    L+PS  S+H++  S     A H+ GV
Sbjct: 264 DANLLLKARLNPNSSLQPSLASHHSHLSSALGRSACHSPGV 304


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 210 DHSALGNQKQPPPTVMT*ERR 272
           D S+L  Q+QP PT  + ERR
Sbjct: 485 DISSLVVQEQPTPTTESEERR 505


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/36 (27%), Positives = 14/36 (38%)
 Frame = +2

Query: 446 SIGSQLRFGRCSCKKVHSRSEPEEVDRPCSDSYGLP 553
           S  S   F  C C   + R+E +    PC+     P
Sbjct: 286 SKSSDYGFTECRCDPGYFRAEKDPKKMPCTQPPSAP 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,396
Number of Sequences: 438
Number of extensions: 3564
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)