Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_E10
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0094 - 627259-628236,628609-628689                               29   3.9  
04_03_0520 - 16748646-16748741,16748821-16748895,16749260-167493...    29   5.2  
10_08_0329 + 16810104-16810718                                         28   9.1  
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538...    28   9.1  
03_05_1157 + 30816143-30816359,30817005-30817120                       28   9.1  
01_01_1131 - 8978005-8978280                                           28   9.1  

>05_01_0094 - 627259-628236,628609-628689
          Length = 352

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 581 GEDDSNMEMTGFDGSATGDVNISGGEGGAVGDAQDCRLSHLTRFQRLEL 435
           G D ++ E+        G +   GG GGAVG A+   +S   R  R+ L
Sbjct: 49  GGDGNSHELLQQQSMIPGTLADGGGGGGAVGPAKPMSMSERARLARIPL 97


>04_03_0520 -
           16748646-16748741,16748821-16748895,16749260-16749362,
           16749635-16749783,16750986-16751110,16751320-16751389
          Length = 205

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 691 QTKMRTMLSLPKWNQSLLMRVCGMTMKMARTMT 593
           Q K+   + LP  + SL +   G TMK+ART T
Sbjct: 170 QQKVHVQIDLPSQSSSLSITKKGQTMKVARTNT 202


>10_08_0329 + 16810104-16810718
          Length = 204

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 509 GEGGAVGDAQDCRLSHLTRFQRLELMRQH 423
           G GG  GD  DC   +    Q+L+L+R++
Sbjct: 21  GSGGGNGDGVDCFTVYFVEAQKLQLLRRN 49


>05_07_0196 +
           28352320-28352522,28352679-28352808,28353774-28353851,
           28355562-28355664,28356109-28356302,28356501-28356518
          Length = 241

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -2

Query: 551 GFDGSATGDVNISGGEGGAVGDAQD--CRLSHLTRFQRLELMRQHFWARWSKEYIVE 387
           GFDG+  G     GG GG VG  QD    ++++ R  R  +      A+ SKE + E
Sbjct: 4   GFDGTENG----GGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQE 56


>03_05_1157 + 30816143-30816359,30817005-30817120
          Length = 110

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 615 IVIPHTLINKLWFHFGSDSIVLIFVW 692
           ++IPH  +NK  FH  S +++LIF+W
Sbjct: 85  LIIPHDTLNKGKFHKRS-NLLLIFLW 109


>01_01_1131 - 8978005-8978280
          Length = 91

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 323 PQPGCEASAMTDWCAILFFAAAQQ 394
           P P    + M+DW  ILFFAA  Q
Sbjct: 40  PLPRVYQAVMSDWALILFFAAGVQ 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,087,952
Number of Sequences: 37544
Number of extensions: 451495
Number of successful extensions: 1419
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)