Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_E09
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical pr...   135   4e-32
U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical pr...   135   4e-32
Z81508-2|CAB04143.1|  323|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome re...    28   7.4  
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical
           protein F38A5.1b protein.
          Length = 575

 Score =  135 bits (326), Expect = 4e-32
 Identities = 53/96 (55%), Positives = 71/96 (73%)
 Frame = -1

Query: 839 RIIXANTGTELQSYAPELVHHFQTHGSPIMIGGGVLAHTILGIEYNSITNETRYLILDPH 660
           R I  N+G E+     EL  HF+T G+P+MIGG +LAHTILG+++N  T ET++L+LDPH
Sbjct: 474 RFIATNSGAEVVERVRELARHFETSGTPVMIGGNMLAHTILGVDFNDTTGETKFLVLDPH 533

Query: 659 YTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQ 552
           YTG+EDI T+ +KGWC WK + FW+K   YN+ LPQ
Sbjct: 534 YTGSEDIKTITSKGWCAWKPASFWSKDHFYNMVLPQ 569


>U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical
           protein F38A5.1a protein.
          Length = 589

 Score =  135 bits (326), Expect = 4e-32
 Identities = 53/96 (55%), Positives = 71/96 (73%)
 Frame = -1

Query: 839 RIIXANTGTELQSYAPELVHHFQTHGSPIMIGGGVLAHTILGIEYNSITNETRYLILDPH 660
           R I  N+G E+     EL  HF+T G+P+MIGG +LAHTILG+++N  T ET++L+LDPH
Sbjct: 488 RFIATNSGAEVVERVRELARHFETSGTPVMIGGNMLAHTILGVDFNDTTGETKFLVLDPH 547

Query: 659 YTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQ 552
           YTG+EDI T+ +KGWC WK + FW+K   YN+ LPQ
Sbjct: 548 YTGSEDIKTITSKGWCAWKPASFWSKDHFYNMVLPQ 583


>Z81508-2|CAB04143.1|  323|Caenorhabditis elegans Hypothetical
           protein F20E11.4 protein.
          Length = 323

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 22/83 (26%), Positives = 39/83 (46%)
 Frame = -2

Query: 661 TILELKISQLLLIKDGAVGRVQIFGIKLLIIIFVCHKQGQLFEWSYSLCSVCNLFFFSIY 482
           TI  + I  + LI   +   V  FGIK     ++  + G+L   S ++ S+    F+S+ 
Sbjct: 190 TISFVGIGIMSLILSSSFSNVIYFGIKCYN--YISQQLGELSTQSQAIKSLQAQLFYSLI 247

Query: 481 CQFTLKC*AFNISLGYLSLIKMY 413
            QF + C    +  G + +I M+
Sbjct: 248 FQFAIPCLLMYLPAGTIFMITMF 270


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 836 IIXANTGTELQSYAPELVHHFQTHGSPIMIGG 741
           I+  +TG E+ +Y P + H+ Q H   ++ GG
Sbjct: 100 IVRLSTGAEVCAYIPNVGHNLQEHSQVLVKGG 131


>AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome
            regulatory particle,non-atpase-like protein 1 protein.
          Length = 981

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 806  QSYAPELVHHFQTHGSPIMIGGGVLAHTILGIEYNSITNETRYLIL 669
            Q+  P+ +  FQTH +P+++  G  A  +   EY S+T     L++
Sbjct: 921  QAGKPKTITGFQTHTTPVLLAHGERAE-LANDEYLSVTPHLEGLVI 965


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 635 TVINKGWCGWKSSDFWNKTAHYNLCL 558
           T  N G+C WK  +F   T  Y+ C+
Sbjct: 487 TWFNAGYCAWKLENFKESTQCYHRCV 512


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,448,106
Number of Sequences: 27780
Number of extensions: 418943
Number of successful extensions: 940
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)