Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_E08
(794 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0664 - 21659497-21659547,21659750-21659860,21659971-216600... 277 7e-75
07_01_1132 + 10531922-10532136,10532307-10532433,10532945-105331... 243 1e-64
08_01_0611 - 5372966-5372992,5373965-5374024,5374260-5374365,537... 37 0.016
07_03_0956 - 22869166-22871145,22871800-22871959,22872311-228723... 29 3.2
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 4.3
02_05_0562 - 29970207-29970224,29970290-29970364,29971083-299714... 28 7.4
02_04_0460 - 23118221-23118406,23118417-23118671,23118763-231188... 28 7.4
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 28 9.8
06_03_1405 - 29938558-29938676,29939045-29939819 28 9.8
04_04_1589 - 34636563-34636856,34636982-34637159,34637349-346374... 28 9.8
01_06_0742 - 31611005-31611843,31611930-31612092,31613463-316135... 28 9.8
>12_02_0664 -
21659497-21659547,21659750-21659860,21659971-21660039,
21660442-21660513,21660669-21660749,21661256-21661348,
21661581-21661733,21661846-21661897,21662033-21662218,
21662830-21662949,21663059-21663297
Length = 408
Score = 277 bits (679), Expect = 7e-75
Identities = 128/241 (53%), Positives = 176/241 (73%), Gaps = 1/241 (0%)
Frame = -1
Query: 791 GFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQVKGIFGFGDSDVIGKITFPSIEA 612
GFD TFIF+D +++G AFY+NM+++ +CVTYN+V GIFGF D IGK++FP ++A
Sbjct: 165 GFDVERTFIFSDFNYVGG--AFYENMVKVARCVTYNKVVGIFGFTPEDHIGKVSFPPVQA 222
Query: 611 APAFSTTFPFIFE-NKIVHCLVPCAIDQDPYFRMTRDVAVRLKLPKPSLIHSTFLPALQG 435
P+F ++FP +F N + CL+PCAIDQDPYFRMTRDVA R+ KPSLI S F PALQG
Sbjct: 223 VPSFPSSFPHLFSGNDQLRCLIPCAIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQG 282
Query: 434 AQHKMSASDCNASIFLNDTPKQIKNKINKYAFSGGQITVEEHREKGGNTDVDISYKYLVF 255
KMSASD N++I++ D+ K+IK K+NKYAFSGG+ ++E HR+ G N DVD+ KYL F
Sbjct: 283 ENTKMSASDPNSAIYVTDSAKEIKTKVNKYAFSGGRDSIELHRKLGANLDVDVPIKYLNF 342
Query: 254 FLEDDDKLAEIKKSYESGQMLTGELKKIAIDTITGYVQDYQARRAKVTDEVMHEYFRIRK 75
FLEDD++L IKK Y+ G+MLTGE+K+ + ++ V +Q RA VT+E++ + R
Sbjct: 343 FLEDDNELEHIKKEYKEGRMLTGEVKQRLVAVLSELVARHQRARALVTEEMVDVFMAARP 402
Query: 74 I 72
+
Sbjct: 403 L 403
>07_01_1132 +
10531922-10532136,10532307-10532433,10532945-10533100,
10533755-10533847,10534010-10534090,10534205-10534276,
10534608-10534676,10534764-10534874,10535039-10535089
Length = 324
Score = 243 bits (595), Expect = 1e-64
Identities = 116/205 (56%), Positives = 151/205 (73%), Gaps = 2/205 (0%)
Frame = -1
Query: 680 VKGIFGFGDSDVIGKITFPSIEAAPAFSTTFPFIFENKIVH--CLVPCAIDQDPYFRMTR 507
+KGIFG D IGK++FP ++AA +FS++FP +F + H CL+PCAIDQDPYFRMT
Sbjct: 115 LKGIFGISPEDQIGKVSFPPVQAAQSFSSSFPHLFHDNDDHLPCLIPCAIDQDPYFRMTC 174
Query: 506 DVAVRLKLPKPSLIHSTFLPALQGAQHKMSASDCNASIFLNDTPKQIKNKINKYAFSGGQ 327
DVA +L KPSLI S F PALQG KMSASD N++I++ D KQIK K+NKYAFSGGQ
Sbjct: 175 DVAPKLGFQKPSLIESRFFPALQGESTKMSASDPNSAIYVTDNSKQIKAKVNKYAFSGGQ 234
Query: 326 ITVEEHREKGGNTDVDISYKYLVFFLEDDDKLAEIKKSYESGQMLTGELKKIAIDTITGY 147
TVE HRE G N DVD+S KYL FFL+DDD+L IKK Y++G+MLTGE+K+ I+ ++
Sbjct: 235 DTVELHRELGANLDVDVSIKYLNFFLQDDDELEHIKKEYKAGRMLTGEVKQRLIEVLSEL 294
Query: 146 VQDYQARRAKVTDEVMHEYFRIRKI 72
V +Q RA+VT+E++ + IR +
Sbjct: 295 VARHQRARAQVTEEMVDAFMAIRPL 319
>08_01_0611 -
5372966-5372992,5373965-5374024,5374260-5374365,
5374481-5374626,5375654-5375733,5375962-5376064,
5376597-5376675,5376854-5377134,5377374-5377548,
5377645-5377679
Length = 363
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = -1
Query: 479 KPSLIHSTFLPALQGAQHKMSASDCNASIFLNDTPKQIKNKINKYAF 339
KP ++ LP L+G Q+KMSASD ++IF++D +I KI K AF
Sbjct: 218 KPIILSHYLLPGLKG-QNKMSASDPASAIFMDDEKAEIDLKI-KQAF 262
>07_03_0956 -
22869166-22871145,22871800-22871959,22872311-22872375,
22872464-22872529,22872634-22872691,22872834-22872925,
22873093-22873332
Length = 886
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 378 SEANKK*DKQICVFGRSNHSGGAQREGW*H*CGYFLQVFSFLP*R 244
++ K+ ++ + R H Q GW H G FL V+ F+P R
Sbjct: 583 TQGRKEYISEVKIISRLRHRNLVQLVGWCHEHGEFLLVYEFMPNR 627
>02_05_0640 -
30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -3
Query: 213 LRVRTDVNRRT*EDSYRHHYRIRSRLSSSKSQGHR*GHARIFQNKEN 73
L R D +RR E SY HH R L+ +S HA IFQ+ N
Sbjct: 235 LTARGDQSRRGAEISYLHHLSCRIILAGLESDLKPATHAVIFQHMVN 281
>02_05_0562 -
29970207-29970224,29970290-29970364,29971083-29971441,
29971572-29971713,29971906-29972025,29972139-29972216,
29972330-29972429,29972522-29972571,29972827-29972904,
29973624-29973751,29973776-29973977,29974045-29974144,
29974236-29974551,29974645-29974690,29975526-29975622,
29977254-29977258,29977643-29977708,29978631-29978690,
29979167-29979272,29979513-29979658,29980731-29980813,
29980951-29981056,29996243-29996266,29996378-29996438,
29996467-29996750,29996914-29997096
Length = 1010
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 542 AIDQDPYFRMTRDVAVRLK-LPKPSLIHSTFLPALQGAQHKMSASDCNASIFLNDTPKQI 366
++DQ +TRD + + KP+++ LP L + D +IF++D +
Sbjct: 191 SMDQRDIIMLTRDYCENINWVNKPTILLHDALPNLLEDPEYVDLRDRGRTIFMHDEEHTL 250
Query: 365 KNKINKYAFSGGQITV 318
+KI + AF ++ V
Sbjct: 251 NSKIQR-AFCPPKVVV 265
>02_04_0460 -
23118221-23118406,23118417-23118671,23118763-23118851,
23119527-23119605,23121317-23121484,23121760-23122137
Length = 384
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = -1
Query: 527 PYFRMTRDVAVRLKLPKPSLIHSTFLPALQGAQHKMSASDC 405
P R+ + + +++P P+++H+T L ++ ++S+ C
Sbjct: 282 PSTRILPTLMIMIRMPSPTILHTTMLAMIRKCHLQLSSLPC 322
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 455 MLSVSEKVWAI*DERPHLASYGSMDPDRSRT 547
MLS SE+ +A+ D+ P LASYG ++P ++T
Sbjct: 1627 MLS-SEENFAVADQDPLLASYGRVEPFGAQT 1656
>06_03_1405 - 29938558-29938676,29939045-29939819
Length = 297
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 284 HQCYHPSLCAPPL*FDLPKTHICL 355
H C H C PP+ DL TH C+
Sbjct: 44 HACTHTHTCNPPV-HDLSHTHTCV 66
>04_04_1589 -
34636563-34636856,34636982-34637159,34637349-34637461,
34637713-34638316,34638401-34638581,34638674-34638816,
34638972-34639141,34639221-34639307,34639414-34639639,
34639825-34639964
Length = 711
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 48 LFFIVLNVDFPYSEIFVHDLICDLGSS 128
L+F ++VDF Y+E V+DL DL S
Sbjct: 265 LYFEPVSVDFSYNEAVVYDLSRDLKQS 291
>01_06_0742 -
31611005-31611843,31611930-31612092,31613463-31613538,
31613615-31613731,31613852-31614016,31614100-31614190,
31614824-31614908,31615013-31615195,31615748-31615996
Length = 655
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 357 DKQICVFGRSNHSGGAQRE 301
D ++CVF R+ H GG +RE
Sbjct: 79 DVELCVFERNLHGGGIERE 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,428,579
Number of Sequences: 37544
Number of extensions: 423128
Number of successful extensions: 994
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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