Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_D22
(522 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 125 3e-30
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 123 2e-29
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 92 5e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 45 6e-06
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.020
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.045
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.24
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.32
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.32
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 29 0.42
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.56
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.56
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 0.73
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 0.97
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.7
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 2.2
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.2
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 27 2.2
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.0
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.0
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 3.9
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 3.9
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 3.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.9
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 5.2
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 5.2
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 5.2
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 5.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 5.2
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 6.8
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 25 6.8
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 25 6.8
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 25 9.0
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 25 9.0
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 9.0
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 9.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 125 bits (302), Expect = 3e-30
Identities = 56/101 (55%), Positives = 77/101 (76%)
Frame = -3
Query: 475 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 296
KEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I
Sbjct: 510 KEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAID 569
Query: 295 DKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 173
+TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 123 bits (296), Expect = 2e-29
Identities = 55/101 (54%), Positives = 77/101 (76%)
Frame = -3
Query: 475 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 296
KEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+
Sbjct: 510 KEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVD 569
Query: 295 DKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 173
+TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 91.9 bits (218), Expect = 5e-20
Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Frame = -3
Query: 475 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTI 299
+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +
Sbjct: 540 EEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAV 599
Query: 298 LDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 176
LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 600 LDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 45.2 bits (102), Expect = 6e-06
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = -3
Query: 469 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTIL 296
EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ + + I
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKIT 613
Query: 295 DKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 173
D K ++ E+ + K E++ + + +Y+
Sbjct: 614 DLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.5 bits (73), Expect = 0.020
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = -3
Query: 478 PKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EKLKEKISDSDK 308
P E +E+ EAE DK ET+ KNALE Y + ++ ++D + S
Sbjct: 552 PTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKF 610
Query: 307 QTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 191
+ +L K D WL + + K Y K ++L + PI
Sbjct: 611 KEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.045
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 472 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 293
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 292 K 290
K
Sbjct: 79 K 79
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.24
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = -3
Query: 475 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 296
KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1607 KEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV---- 1661
Query: 295 DKCNDTIKWLDSNQLADKEEYEHKQKELE 209
K + + A YE K ++L+
Sbjct: 1662 -KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 29.5 bits (63), Expect = 0.32
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = -3
Query: 481 SPKEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKE 329
+PKE ER+ E + NED K+K IQ KN+ + + ST E K+
Sbjct: 485 APKETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKD 544
Query: 328 KISDSDKQTILDKCND 281
I K +I + +D
Sbjct: 545 TIPSRFKTSISTEVHD 560
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.32
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -3
Query: 484 FSPKEEIERMVNE-AEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 308
F+ ++ +E E +EK ++ K + KNA ++ M DE+ E S K
Sbjct: 92 FADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKK 151
Query: 307 QTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 215
+ K +D + LD + E+ + K+K+
Sbjct: 152 KKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 29.1 bits (62), Expect = 0.42
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = -3
Query: 508 HHYQRQSXFSPKEEIERMVNEAEKYRNEDDK---QKETIQAKNALESYCFSMKSTMEDEK 338
H Q Q E ++ + ++ RNEDD K + + ++L+ + + K
Sbjct: 122 HSLQLQEEEKSSESLDSHTHPPKRVRNEDDSLTFSKTSPVSPSSLKDGASNTVTNDASNK 181
Query: 337 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 173
+K + S+S + L + T + +E K++ + Y P+ + ++
Sbjct: 182 IKSEASESASPSALQALDSTAAGSSKEHSSPHDETVKKEENDKDQYPPMTKEQHK 236
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.56
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 334 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 209
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 0.56
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 451 NEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 272
N+ E + DDKQ + KN+LE+ M+ + E K D ++ LDK D K
Sbjct: 1272 NKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK 1330
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.3 bits (60), Expect = 0.73
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = -3
Query: 448 EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDSDKQTILDKCNDTIK 272
EAE+ + E ++Q+ Q K E + K E EKL KE+I ++Q ++ + ++
Sbjct: 94 EAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRKEERDQKLR 152
Query: 271 WLDSNQLADKEEYEHKQKE 215
+ Q +E+ +K+++
Sbjct: 153 EKEEAQRLRQEQILNKERQ 171
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 0.97
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -3
Query: 472 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 296
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 295 DKCNDTIKWLDSNQLADKEEYEHKQK 218
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 457 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 353
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -3
Query: 454 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 275
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 274 KWLDSNQLADKEEYEHKQKELEGIYNPI 191
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 427 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 266
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -3
Query: 427 EDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN-- 257
E K+ ET++ KN+ + + ++ E LK +K ++++ IK + N
Sbjct: 503 EVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVS 562
Query: 256 QLADK-EEYEHKQKELEGIYNPII 188
+L +EY +K K+ E YN ++
Sbjct: 563 ELNGTIDEYRNKLKDKEETYNEVM 586
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/94 (17%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -3
Query: 502 YQRQSXFSPKEEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMKSTMEDE 341
Y R + +++ R ++ +N+++ +++ A + L ++ + +DE
Sbjct: 806 YNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFRKFYDDE 865
Query: 340 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 239
KLK+ D ++ N+ + D ++D E
Sbjct: 866 KLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 472 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 302
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 165 EESPEVCRASRAEHPEPE 112
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 3.9
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = -3
Query: 472 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 293
E+ + E EK + +A+ A + +E EK KEK D D++
Sbjct: 230 EDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQE---- 285
Query: 292 KCNDTIKWLDSNQLADKEEYEHKQKELE 209
DT+ D NQ+ +E E QKE++
Sbjct: 286 --QDTVS--DKNQI---DEIEKGQKEVD 306
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 3.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 424 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 248
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 247 DK 242
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 475 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 296
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 295 D 293
D
Sbjct: 451 D 451
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -3
Query: 481 SPKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 356
S + E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 298 SSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -3
Query: 475 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 296
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 295 DKC 287
D C
Sbjct: 754 DGC 756
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 394 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 269
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 496 RQSXFSPKEEIERMVNEAEKYRNEDDK--QKETIQAKNALESYCFS 365
R + F P + + ++N + RN D+ QK T+Q +A+ CFS
Sbjct: 323 RLNAFGPLK-FDALLNFITEMRNVVDQLYQKSTLQPNDAVPGLCFS 367
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 454 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC 287
V + E+ + D T+Q K +S FS K + E L +KIS+ D QT ++C
Sbjct: 402 VIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEIDSQTSFEQC 452
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -3
Query: 430 NEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 254
NE + Q + ++ K N + + E+ +K + + D L+ + + L N
Sbjct: 590 NELNSQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNL 649
Query: 253 LADKEEYEHKQKELEGIYNPI 191
YEH QK + ++N +
Sbjct: 650 EDSTARYEHLQKSFKNVFNQL 670
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 382 ESYCFSMKSTMEDEKLK---EKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKEL 212
E+ + + +M D+ L E+ SDSD++ D +++ + + ++ + ++ E
Sbjct: 1803 EALSGAAQDSMGDQSLSSSSEESSDSDREEPPDLYRNSVLGIFQGDIVNENDENYEDSED 1862
Query: 211 EGIY 200
+G+Y
Sbjct: 1863 DGVY 1866
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 505 HYQRQSXFSPKEEIERMVNEAEK-YRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 329
H ++ + K IER+VN A K Y E K+ N ++ C S+ + + D L
Sbjct: 488 HSSKKVSYETKYRIERLVNAALKPYYREAKISKDQFALFN--KNICRSVYTALSDGTLSL 545
Query: 328 KISDSDK--QTILDKCNDTIKWLDSN 257
+ K +TI +K + I+ L ++
Sbjct: 546 EGPQQHKISKTIREKVVNCIQSLSND 571
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 171 VPEESPEVCRA--SRAEHPEPEVPPPGLEALAPPSRRS 64
V +SP R SR P E P A PPSRR+
Sbjct: 891 VSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 286 NDTIKWLDSNQLADKEEYEHKQKELEGIYNP 194
N+ +K D + ++ ++E E + +GIY P
Sbjct: 141 NNVVKEDDKSSISSEDEEEELRSAKDGIYRP 171
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 9.0
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = -3
Query: 454 VNEAEKYRNEDDKQK-ETI----QAKNALE-SYCFSMKSTME-DEKLKEKISDSDKQTIL 296
V E K R+ED+ QK ET+ + K +E S+ S + E +K++ S+ K +
Sbjct: 463 VEEPSKKRDEDNHQKEETVTQPKREKTPVEKSFPKPASSPVTFSEDVKKEPSEEKKLEVS 522
Query: 295 DKCNDTIKWLDSNQLADKEE-YEHKQKE 215
D+ +S ++ +KE Y K K+
Sbjct: 523 DEAPKAAPLAESKKVEEKEPFYVSKDKK 550
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 9.0
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 367 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPII 188
S+ S+ KL D K + L C ++ K DSNQ+ + E K+K+ + II
Sbjct: 188 SLVSSNTASKLHLGRKDIVKLSELRNCINSSK--DSNQIQELENLLRKEKQRNTEHEKII 245
Query: 187 TKM 179
+M
Sbjct: 246 RRM 248
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 367 SMKSTMEDEKLKEKISD 317
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,844,083
Number of Sequences: 5004
Number of extensions: 34540
Number of successful extensions: 196
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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