Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_D21
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-8|AAF36009.2| 184|Caenorhabditis elegans Hypothetical ... 140 5e-34
CU457741-18|CAM36360.1| 365|Caenorhabditis elegans Hypothetical... 37 0.009
AC024810-6|AAF60762.2| 180|Caenorhabditis elegans Hypothetical ... 31 0.56
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 5.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 5.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 5.2
AC025715-11|AAP13753.1| 516|Caenorhabditis elegans Hypothetical... 27 6.9
AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical... 27 6.9
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 27 9.1
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 27 9.1
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 27 9.1
AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical... 27 9.1
>AC024200-8|AAF36009.2| 184|Caenorhabditis elegans Hypothetical
protein Y71F9AL.14 protein.
Length = 184
Score = 140 bits (340), Expect = 5e-34
Identities = 61/161 (37%), Positives = 101/161 (62%)
Frame = -3
Query: 552 SGNKVSRQTVLCGXQNIVLHGKVIVQSDAIIRGDLANVKTGRFCIISKGSVIRPPFKKFS 373
+GNKV+++ + G QNI++ GK I++ IRGDLA VK G++C++ IRP K FS
Sbjct: 18 TGNKVNKKHAIAGTQNILIAGKTIIEEGVTIRGDLATVKIGKYCVLKSRCNIRPCMKIFS 77
Query: 372 KGVAFFPLQMGDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAE 193
K + +GD+VF+ E VVNAA + ++V++G V+G CV+++C + ++V+PA+
Sbjct: 78 KKPTMCNVMIGDYVFIEEECVVNAAQIYAFVHLGARAVLGNGCVIRECSRVLPDTVVPAD 137
Query: 192 TIVPSFARYSGSPAHLITTLPEAMPDLMTEFTKSYYQHFLP 70
+ P ++ G+PA ++ T P +LM E YY +F+P
Sbjct: 138 ALFPPYSTIGGNPAQVVGTEPRCTENLMMEAITMYYDNFVP 178
>CU457741-18|CAM36360.1| 365|Caenorhabditis elegans Hypothetical
protein C42C1.5 protein.
Length = 365
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = -3
Query: 480 VQSDAIIRGDLA---NVKTGRFCIISKGSVIRPPFKKFSKGVAFFPLQMGDHVFVGENTV 310
+ A IRG++ + G C+I VI P K GV + +G +
Sbjct: 249 IHPTATIRGNVMVDPSATVGENCVIGPDVVIGPRVK-IEGGVRILHSTILSDSSIGNYSW 307
Query: 309 VNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAETIVP 181
V+ ++VG +IG V I CV+ D +++D L +++P
Sbjct: 308 VSGSIVGRKCHIGSWVRIENICVIGDDVVVKDELYLNGASVLP 350
>AC024810-6|AAF60762.2| 180|Caenorhabditis elegans Hypothetical
protein Y54E10A.5 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.56
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -3
Query: 342 GDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDN-------SVLPAETIV 184
G + +G+ + S Y+G VIG VL+D C + D+ +V + +
Sbjct: 66 GQPMIIGDWNIFQVHSKSSAKYVGSRNVIGVHAVLEDGCSVSDDCSVGAKCTVFSHQNLE 125
Query: 183 PSFARYSGSPAHLITTLPEAMPDLMTEFTK 94
PS + Y+ + T P EF +
Sbjct: 126 PSVSVYAATNLSRTTKTPNMTSPHQIEFLR 155
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -3
Query: 345 MGDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAETIVPSFARY 166
+G H + T + ++++G IG+N VI + D +I + + +P E+I+ + Y
Sbjct: 348 IGAHTEISSKTRITSSMIGKNCKIGENCVI-EYAFIGDDVVIPNGAHIPKESIIGNGVMY 406
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 161 PEYLAKEGTIVSAGRTELSSIMQQSLSTHLLPITTFFPM*TYEPTTAAFTTVFSPTKT*S 340
P A++ I T+ S+ +QQS +P+T + PT+A V SPT
Sbjct: 760 PHSSAQQQPIPPPLSTQTSAEIQQSAQQPSVPVTMIANIPAMSPTSAQPQPVLSPTSAAV 819
Query: 341 PI 346
P+
Sbjct: 820 PV 821
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 161 PEYLAKEGTIVSAGRTELSSIMQQSLSTHLLPITTFFPM*TYEPTTAAFTTVFSPTKT*S 340
P A++ I T+ S+ +QQS +P+T + PT+A V SPT
Sbjct: 760 PHSSAQQQPIPPPLSTQTSAEIQQSAQQPSVPVTMIANIPAMSPTSAQPQPVLSPTSAAV 819
Query: 341 PI 346
P+
Sbjct: 820 PV 821
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 148 PDHYITRSNARSDDRVYKELLSAL 77
PDH+ + S DR+ K+LLS L
Sbjct: 1067 PDHFCSELQLESGDRILKKLLSGL 1090
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 148 PDHYITRSNARSDDRVYKELLSAL 77
PDH+ + S DR+ K+LLS L
Sbjct: 1067 PDHFCSELQLESGDRILKKLLSGL 1090
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 148 PDHYITRSNARSDDRVYKELLSAL 77
PDH+ + S DR+ K+LLS L
Sbjct: 1067 PDHFCSELQLESGDRILKKLLSGL 1090
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 148 PDHYITRSNARSDDRVYKELLSAL 77
PDH+ + S DR+ K+LLS L
Sbjct: 1067 PDHFCSELQLESGDRILKKLLSGL 1090
>AC025715-11|AAP13753.1| 516|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12b protein.
Length = 516
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 450 LANVKTGRFCIISKGSVIRPPFKKFSKGVAFFPLQMGDHVFVG 322
LAN T C + +VI P F K K FF G H +G
Sbjct: 76 LANHPTAGGCHLPDFTVITPVFFKGHKTPVFFVANRGHHADIG 118
>AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12a protein.
Length = 1187
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 450 LANVKTGRFCIISKGSVIRPPFKKFSKGVAFFPLQMGDHVFVG 322
LAN T C + +VI P F K K FF G H +G
Sbjct: 747 LANHPTAGGCHLPDFTVITPVFFKGHKTPVFFVANRGHHADIG 789
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 325 NKNMITHLQGKKCDSFAEFFKRRSYHGAFADYTKSTCFNIS 447
N +MI L K D FAE KR S AF DY + ++ S
Sbjct: 262 NTSMILFLNKK--DLFAEKIKRTSIKSAFPDYKGAQTYDES 300
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 325 NKNMITHLQGKKCDSFAEFFKRRSYHGAFADYTKSTCFNIS 447
N +MI L K D FAE KR S AF DY + ++ S
Sbjct: 262 NTSMILFLNKK--DLFAEKIKRTSIKSAFPDYKGAQTYDES 300
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 325 NKNMITHLQGKKCDSFAEFFKRRSYHGAFADYTKSTCFNIS 447
N +MI L K D FAE KR S AF DY + ++ S
Sbjct: 262 NTSMILFLNKK--DLFAEKIKRTSIKSAFPDYKGAQTYDES 300
>AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical
protein F39E9.1 protein.
Length = 443
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 248 LLPITTFFPM*TYEPTTAAFTTVFSPTKT*SPICKGKNATPLLN 379
LLP T P T PTT+ TT PT T KG + P+++
Sbjct: 393 LLPPGTSTPSTTVAPTTSVVTTPVVPTTT-----KGASCIPIID 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,767,064
Number of Sequences: 27780
Number of extensions: 235050
Number of successful extensions: 651
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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