Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_D07
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   2.7  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    23   2.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.7  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   4.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.7  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 463 MVIYVNI*KKSLSECSNFFKIN 398
           MV+Y+ +  KSL   SN F IN
Sbjct: 72  MVVYIFLSTKSLRTPSNLFVIN 93


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 463 MVIYVNI*KKSLSECSNFFKIN 398
           MV+Y+ +  KSL   SN F IN
Sbjct: 38  MVVYIFLSTKSLRTPSNLFVIN 59


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +2

Query: 692 ICIHFK*QKISKMAVSVL*FTKSDRLSAFSNTILLKIDK 808
           +C+ F+ QK  K ++  +   ++DR+ ++ +   LK DK
Sbjct: 116 VCLKFEEQKRRKKSLDDVKILRNDRIDSYKSN--LKCDK 152


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 456 ITMYMCTVFFFEKIIYTIY 512
           I+M  CT FF   I+ T Y
Sbjct: 2   ISMLRCTFFFLSVILITSY 20


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 646 NLISYNNLALCRQFLNMY 699
           N+ SY N A  ++FL++Y
Sbjct: 69  NIDSYTNAAAVKEFLSIY 86


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 646 NLISYNNLALCRQFLNMY 699
           N+ SY N A  ++FL++Y
Sbjct: 69  NIDSYTNAAAVKEFLSIY 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,242
Number of Sequences: 438
Number of extensions: 4831
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)