Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_D05
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352...    34   0.17 
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549...    29   6.4  
08_01_0465 + 4099721-4100556,4101505-4103614                           29   6.4  

>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
            3523189-3523270,3523420-3523692,3523953-3524162,
            3524252-3524337,3525197-3525289,3526003-3526227,
            3526320-3526930,3529328-3529395,3529491-3529679,
            3529773-3529901,3530013-3532484
          Length = 1579

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 25/104 (24%), Positives = 46/104 (44%)
 Frame = -3

Query: 617  YLNTEKKEVPVIETNVAAEDSALKKSLLQKAAIDAKRNIVDISELDIKHQKTSNTKKGAD 438
            +L T  +E+  ++ +      A  ++ L + A+DAKRN   +S+    H K+ + KK  D
Sbjct: 865  FLRTHLEEL--VDKDARERSDAASEAFLAELALDAKRNANKVSDTKQSHDKSKDKKKVKD 922

Query: 437  EFDFFADMKPVIEKAAVVSIDDLVSKEFSSKLTFVPDENQDENE 306
                  D+K +      +   D V +E S +     D   ++ E
Sbjct: 923  SRK-SKDLKDLSWSDQYLVRPDSVDEETSEQSLSTSDNYLNDQE 965


>09_04_0613 +
           18953761-18953932,18954672-18954799,18954885-18954956,
           18955033-18955146,18955547-18955615,18955691-18955747,
           18956262-18956315,18956387-18956449,18956543-18956605,
           18956803-18956967,18957111-18957266,18957315-18957416
          Length = 404

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 23/77 (29%), Positives = 43/77 (55%)
 Frame = -3

Query: 677 TNRQLTMAETESISIEADTIYLNTEKKEVPVIETNVAAEDSALKKSLLQKAAIDAKRNIV 498
           T R L  AE ++    A  I L   +K++  ++ ++ A++S  KKS ++  A DA + + 
Sbjct: 101 TKRSLA-AEEQAGKANARAIEL---EKQIEKLKKDIEAQNS--KKSTVEARAGDADKKVQ 154

Query: 497 DISELDIKHQKTSNTKK 447
           +++    K QKTS+ +K
Sbjct: 155 ELNAKLEKLQKTSDEQK 171


>08_01_0465 + 4099721-4100556,4101505-4103614
          Length = 981

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -3

Query: 518 DAKRNIVDIS-ELDIKHQKTSNTKKGADEFDFFADMKPVIE-KAAVVSIDDLVSKE 357
           D K+ + DI  +LD ++   SNT    DE      +K ++E K ++V IDD+  K+
Sbjct: 236 DMKKVLRDILIDLDKQNYMHSNTTTTLDERQLINGIKDLVEKKRSIVIIDDIWDKK 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,708,743
Number of Sequences: 37544
Number of extensions: 300116
Number of successful extensions: 792
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)