Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_D05
         (871 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023217-1|BAA76844.2| 1956|Homo sapiens KIAA1000 protein protein.     32   3.1  
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      31   4.1  
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote...    31   4.1  
AK097433-1|BAC05051.1|  691|Homo sapiens protein ( Homo sapiens ...    30   9.5  
AJ311392-1|CAC60255.1|  691|Homo sapiens putative nuclear protei...    30   9.5  

>AB023217-1|BAA76844.2| 1956|Homo sapiens KIAA1000 protein protein.
          Length = 1956

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 28/136 (20%), Positives = 55/136 (40%)
 Frame = -3

Query: 752  EEEVILRESTINQVNSEEDWSDWDNTNRQLTMAETESISIEADTIYLNTEKKEVPVIETN 573
            E E  L +    ++N E +    +  N +L     E++      +     KKE+ + + N
Sbjct: 1055 ELEGALEQERKARMNCERELHKLEG-NLKLNRESMENLESSQRHLAEELRKKELELSQMN 1113

Query: 572  VAAEDSALKKSLLQKAAIDAKRNIVDISELDIKHQKTSNTKKGADEFDFFADMKPVIEKA 393
               E+     + LQK   + +  I D+ E  ++ ++T+  K   +  D   D+  + E+ 
Sbjct: 1114 SKVENEKGLVAQLQKTVKELQTQIKDLKE-KLEAERTTRAKMERERADLTQDLADLNERL 1172

Query: 392  AVVSIDDLVSKEFSSK 345
              V    L   E + K
Sbjct: 1173 EEVGGSSLAQLEITKK 1188


>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = -3

Query: 680  NTNRQLTMAETESISIEADTIYLNTEKKEVPVIETNVAAEDSALKKSLLQKAAIDAKRNI 501
            N N+ +   +T   ++E D+      KKE  + E   A +D   +KSL +K  ++ K  +
Sbjct: 1072 NQNKLIQELKTAKATLEQDSA-----KKEQQLQERCKALQDIQKEKSLKEKELVNEKSKL 1126

Query: 500  VDISELDIKHQK 465
             +I E+  + +K
Sbjct: 1127 AEIEEIKCRQEK 1138


>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
            protein.
          Length = 1410

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = -3

Query: 680  NTNRQLTMAETESISIEADTIYLNTEKKEVPVIETNVAAEDSALKKSLLQKAAIDAKRNI 501
            N N+ +   +T   ++E D+      KKE  + E   A +D   +KSL +K  ++ K  +
Sbjct: 1072 NQNKLIQELKTAKATLEQDSA-----KKEQQLQERCKALQDIQKEKSLKEKELVNEKSKL 1126

Query: 500  VDISELDIKHQK 465
             +I E+  + +K
Sbjct: 1127 AEIEEIKCRQEK 1138


>AK097433-1|BAC05051.1|  691|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40114 fis, clone TESTI2008762. ).
          Length = 691

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -3

Query: 440 DEFDFFADMKPVIEKAAVVSIDDLVSKEFSSKLTFVPDENQDENEGWGENWND*E 276
           DE      +KP I++  +V  DD    +  + L  VPD+N D++E   +N +D E
Sbjct: 104 DESPECCHVKPAIQEPPIVISDDDNDDDNGNDLE-VPDDNSDDSEAPDDNSDDSE 157


>AJ311392-1|CAC60255.1|  691|Homo sapiens putative nuclear protein
           protein.
          Length = 691

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -3

Query: 440 DEFDFFADMKPVIEKAAVVSIDDLVSKEFSSKLTFVPDENQDENEGWGENWND*E 276
           DE      +KP I++  +V  DD    +  + L  VPD+N D++E   +N +D E
Sbjct: 104 DESPECCHVKPAIQEPPIVISDDDNDDDNGNDLE-VPDDNSDDSEAPDDNSDDSE 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,876,435
Number of Sequences: 237096
Number of extensions: 1706044
Number of successful extensions: 3370
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3361
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)