Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_D02
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   2.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   6.8  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   6.8  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.0  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 192 FCNVANIKIQYSRIIM 145
           FCN+ N+K++  RII+
Sbjct: 203 FCNLENVKLKELRIIL 218


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 154 NYHDYFIFVIQIHVLY 107
           NYH +FI VI +  LY
Sbjct: 4   NYHFFFILVITLIFLY 19


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 342 SDLVTFFCNSAIRFI*DYCSRS 277
           SDLVTF C  ++  + D   RS
Sbjct: 306 SDLVTFLCYPSVMNLDDLTRRS 327


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 342 SDLVTFFCNSAIRFI*DYCSRS 277
           SDLVTF C  ++  + D   RS
Sbjct: 306 SDLVTFLCYPSVMNLDDLTRRS 327


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -1

Query: 476 SFIIQCLSMNRFH 438
           SF++ C+SM+R++
Sbjct: 126 SFVLVCISMDRYY 138


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 552 KIYPCVNKILICNPNNYKRHFMKQKSSQNN 641
           KI   ++   I N NNYK ++     + NN
Sbjct: 313 KIISSLSNKTIHNNNNYKYNYNNNNYNNNN 342


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 552 KIYPCVNKILICNPNNYKRHFMKQKSSQNN 641
           KI   ++   I N NNYK ++  + +  NN
Sbjct: 80  KIISSLSNKTIHNNNNYKYNYNNKYNYNNN 109


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 666 RTNLFTASRCFETIFVS*NGVYNC 595
           RT L  +    E + +  NG+Y C
Sbjct: 287 RTRLLGSVLALEAVTLEDNGIYRC 310


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 666 RTNLFTASRCFETIFVS*NGVYNC 595
           RT L  +    E + +  NG+Y C
Sbjct: 287 RTRLLGSVLALEAVTLEDNGIYRC 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,555
Number of Sequences: 438
Number of extensions: 4388
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)