Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_C17
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0263 + 28002315-28002634,28003263-28003350,28004296-280043...    86   4e-17
03_06_0146 - 31976538-31978643,31978653-31978751                       32   0.64 
03_06_0195 + 32256771-32258792                                         31   1.1  
09_06_0079 - 20732041-20732097,20732219-20732301,20732661-207328...    29   3.4  
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883...    29   6.0  
12_01_0774 + 7063465-7064011,7065183-7065791,7067905-7068464,706...    28   7.9  

>01_06_0263 +
           28002315-28002634,28003263-28003350,28004296-28004377,
           28004637-28004764
          Length = 205

 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
 Frame = -2

Query: 369 MQVLVSNFTEEQLNRYEMYRRAAFPKAAVKRLMQTITGC-SVGQNVVIAMSGIAKVFIGX 193
           M  ++S FTE+Q+NRYE +RR+ F K+ +K+L+ +ITG   +     I +SGIAK+F+  
Sbjct: 106 MNAILSQFTEDQMNRYESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVA- 164

Query: 192 XXXXXXXXXEKSGESGPLQPKHLREALRRLRVRGAIPSRKVHRSF 58
                     +  +SGP++P H+REA RRL++ G IP R V R F
Sbjct: 165 -----RIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLF 204


>03_06_0146 - 31976538-31978643,31978653-31978751
          Length = 734

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = -2

Query: 813 KEEPEYTTL-VNYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQT 637
           +E PE+T + V+Y + D ++++E +    Y +I    E++++ + + +  +D+ E   + 
Sbjct: 395 EEWPEFTGVPVSYDDIDTDSDMEIDG-GKYDDIDS--ESLYEEESVSDEQSDDEEEPEEF 451

Query: 636 DVLTDVTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHIY 457
                    YES   D  FE  Y Q  +DG   +   G+ ES +     DF H  S    
Sbjct: 452 AGGGYDDIDYESLNGD-DFEE-YLQVLADGGIDNENFGEEESVLDDEVMDFFHGLSDEFL 509

Query: 456 EF 451
           +F
Sbjct: 510 DF 511


>03_06_0195 + 32256771-32258792
          Length = 673

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = -2

Query: 813 KEEPEYTTL-VNYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQ- 640
           +E PE+T + V+Y + D ++++E +    Y +I    E++++ + + +  +D+ E   + 
Sbjct: 336 EEWPEFTGVPVSYNDIDTDSDMEIDG-GKYDDIDS--ESLYEEESVSDEQSDDEEEPEEF 392

Query: 639 TDVLTDVTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHI 460
                D  D+    G+D++    Y Q  +DG   +   G+ ES +     DF H  +   
Sbjct: 393 AGGGYDGIDYESLNGDDFE---EYLQVLADGGIDNESFGEEESVLDDEVLDFFHGLNDEF 449

Query: 459 YEF 451
            +F
Sbjct: 450 LDF 452


>09_06_0079 -
           20732041-20732097,20732219-20732301,20732661-20732834,
           20732927-20733059,20733226-20733310,20733527-20733650,
           20733835-20733904,20734643-20734669,20734788-20734949
          Length = 304

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 354 SNFTEEQLNRYEMYRRAAFPKAAVKRLMQTITGCSVGQ-NVVIAMSGIAKVFIG 196
           S+     L+R    RRA    AA     Q   GCS  +   V+AM+G  K F+G
Sbjct: 5   SSLASSHLSRLADLRRAGVAAAAPAHPQQLRLGCSRRRAQRVVAMAGSGKFFVG 58


>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
            30288447-30288641,30288743-30289363,30289688-30290257,
            30290332-30293638,30293764-30293863,30293978-30295014,
            30295256-30295604,30296299-30296374,30296456-30297022,
            30297094-30297238,30298281-30298405,30298491-30298582,
            30298646-30298828,30298946-30299058,30299499-30299649,
            30299720-30299882
          Length = 2701

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 220  RHSNNNILSNRTTGDCLHKSLYSSFWKG 303
            RH  N IL + TTGDC+H      F KG
Sbjct: 2492 RHGEN-ILLDSTTGDCIHVDFSCLFDKG 2518


>12_01_0774 +
           7063465-7064011,7065183-7065791,7067905-7068464,
           7069411-7069530
          Length = 611

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 549 GEKYDRGVGDAESSVVPATTD-FHHTESSHIYEFQTAEDLIN 427
           GE+ +    D  S   P T D  HH E   +Y+F  A+  IN
Sbjct: 118 GEEEEGQATDGASHSQPQTIDGAHHAEDQTVYDFPIAQVAIN 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,970,760
Number of Sequences: 37544
Number of extensions: 269642
Number of successful extensions: 756
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)