SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_C13
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0034 + 318432-318825,318902-319851                              222   3e-58
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467          221   6e-58
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...   219   2e-57
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998    218   5e-57
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349    218   5e-57
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379    217   6e-57
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...   217   1e-56
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...   216   2e-56
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    85   8e-17
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918...    83   2e-16
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257...    81   9e-16
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788...    77   1e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324...    40   0.002
05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625     31   1.0  
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280     30   2.3  
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438...    29   3.1  
04_01_0516 + 6772617-6773042                                           29   5.3  
12_01_0200 - 1483266-1483956,1484023-1484134,1484659-1484957,148...    28   7.1  
08_01_0426 - 3757110-3758405                                           28   7.1  
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622     28   7.1  
02_01_0485 + 3487578-3487635,3488281-3488399,3488600-3488698,348...    28   7.1  
03_05_0401 - 23819230-23819829,23822612-23823194,23823303-23824027     28   9.3  
02_02_0375 + 9543411-9543872,9547222-9547290,9547382-9547384,954...    28   9.3  

>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score =  222 bits (542), Expect = 3e-58
 Identities = 97/120 (80%), Positives = 114/120 (95%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQML++QNKNSS+FVEWIPNNVK+ VCDIPP GLKM+STFIGN+T+IQE
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQE 376

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDDTEF 404
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+ATA+D+ E+
Sbjct: 377 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDEGEY 436


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score =  221 bits (539), Expect = 6e-58
 Identities = 96/119 (80%), Positives = 114/119 (95%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQML++QNKNSS+FVEWIPNNVK++VCDIPP GLKM+STFIGN+T+IQE
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQE 376

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDDTE 407
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLV+EYQQYQ+ATA+D+ E
Sbjct: 377 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADDEEE 435


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score =  219 bits (535), Expect = 2e-57
 Identities = 94/120 (78%), Positives = 115/120 (95%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQM+++QNKNSS+FVEWIPNNVK++VCDIPP+GL M+STFIGN+T+IQE
Sbjct: 338 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQE 397

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDDTEF 404
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+ATA+++ E+
Sbjct: 398 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEY 457


>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score =  218 bits (532), Expect = 5e-57
 Identities = 93/119 (78%), Positives = 115/119 (96%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQML++QNKNSS+FVEWIPNNVK++VCDIPP+GLKM++TF+GN+T+IQE
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQE 376

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDDTE 407
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLV+EYQQYQ+ATA+++ E
Sbjct: 377 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYE 435


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score =  218 bits (532), Expect = 5e-57
 Identities = 93/120 (77%), Positives = 115/120 (95%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQM+++QNKNSS+FVEWIPNNVK++VCDIPP+GL M+STFIGN+T+IQE
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQE 376

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDDTEF 404
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+ATA+++ ++
Sbjct: 377 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDY 436


>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score =  217 bits (531), Expect = 6e-57
 Identities = 95/117 (81%), Positives = 113/117 (96%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQML++QNKNSS+FVEWIPNNVK++VCDIPP GLKM+STFIGN+T+IQE
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQE 376

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDD 413
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLV+EYQQYQ+ATAE++
Sbjct: 377 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEE 433


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score =  217 bits (529), Expect = 1e-56
 Identities = 94/117 (80%), Positives = 111/117 (94%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F GRMS KEVDEQM+++QNKNSS+FVEWIPNNVK++VCDIPP GL M+STF+GN+T+IQE
Sbjct: 333 FRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQE 392

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDD 413
           +F+R+SEQF+AMFRRKAFLHWYT EGMDEMEF EAESN+NDLV+EYQQYQ+ATAEDD
Sbjct: 393 MFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATAEDD 449


>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score =  216 bits (527), Expect = 2e-56
 Identities = 94/120 (78%), Positives = 114/120 (95%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQE 584
           F G+MS KEVDEQM+++QNKNSS+FVEWIPNNVK++VCDIPP+GL M+STF+GN+T+IQE
Sbjct: 497 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQE 556

Query: 583 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEATAEDDTEF 404
           +F+R+SEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+ATA D+ E+
Sbjct: 557 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA-DEAEY 615


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGL--------KMSSTFI 608
           + G +  K+V+  + SI+ + +  FV+W P   K  +   PP  +        + +   I
Sbjct: 400 YRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMI 459

Query: 607 GNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEA 428
            N TA+ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++    
Sbjct: 460 SNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519

Query: 427 TAEDDTE 407
             +DD E
Sbjct: 520 VEDDDEE 526


>07_03_0994 +
           23190344-23190456,23191367-23191581,23191663-23191862,
           23192420-23192928,23193048-23193363
          Length = 450

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPK--------GLKMSSTFI 608
           + G +  K+V+  + +I+ K +  FV+W P   K  +   PP          ++ +   I
Sbjct: 319 YRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMI 378

Query: 607 GNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEA 428
            N TA+ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++    
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438

Query: 427 TAEDDTE 407
            A+D+ +
Sbjct: 439 GADDEND 445


>03_05_0974 +
           29324025-29324117,29325064-29325298,29325385-29325755,
           29325864-29326520
          Length = 451

 Score = 81.0 bits (191), Expect = 9e-16
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPK--------GLKMSSTFI 608
           + G +  K+V+  + +I+ K +  FV+W P   K  +   PP          ++ +   I
Sbjct: 319 YRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMI 378

Query: 607 GNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQEA 428
            N+T++ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+EA     DL +  + Y+E 
Sbjct: 379 SNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 435

Query: 427 TAEDD 413
            AE D
Sbjct: 436 GAESD 440


>11_02_0058 +
           7879859-7879951,7880844-7881078,7881165-7881535,
           7881648-7882304
          Length = 451

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
 Frame = -1

Query: 763 FXGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPK--------GLKMSSTFI 608
           + G +  K+V+  + +I+ K +  FV+W P   K  +   PP          ++ +   I
Sbjct: 319 YRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMI 378

Query: 607 GNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 440
            N+T++ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++
Sbjct: 379 SNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434


>05_01_0412 -
           3248405-3248458,3248533-3248637,3248950-3249078,
           3249279-3249353,3249520-3249624,3249714-3249767,
           3249970-3250370,3250583-3250694,3250886-3251086,
           3251844-3251972
          Length = 454

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
 Frame = -1

Query: 757 GRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 578
           G +   +V E +  I+ +    F+EW P ++            ++S   + N T+I+ LF
Sbjct: 328 GEVDPTQVHESLQRIRERKLVNFIEWGPASI------------QVSGLMLANHTSIRHLF 375

Query: 577 KRISEQFSAMFRRKAFLHWYTG----EGMDEMEFNEAESNVNDLVSEYQ 443
            +   Q+  + +++AFL  Y      E  D  EF+E+   +  LV EY+
Sbjct: 376 SKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424


>05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625
          Length = 768

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 319 HFRSEIALTLHSKGYLGGVVISI 251
           H R  IALTLHS+ Y+G  V S+
Sbjct: 219 HVREVIALTLHSRAYVGACVASL 241


>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
          Length = 434

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 453 DTRSLTLLSASLNSISSMPSPVYQCKKALRLNMAENCSDI 572
           + RSL LL A  N +  +PS + +      LN++ N SD+
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDL 303


>02_05_1298 -
           35542250-35542831,35543218-35543410,35543511-35543827,
           35544144-35544186,35545845-35545900,35546028-35546102,
           35546249-35546345,35546422-35546546,35547063-35547167,
           35547295-35547432,35547758-35547831,35547995-35548065,
           35548168-35548363,35548482-35548572,35549264-35549342,
           35549431-35549491,35549745-35549814,35549913-35549987,
           35550119-35550194,35550403-35550489,35550744-35550880,
           35551000-35551063,35551351-35551415
          Length = 958

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 465 LTLLSASLNSISSMPSPVYQCKKALRLNMAEN 560
           L+ L+AS N+IS +P  +  C K  RLN+  N
Sbjct: 139 LSELNASNNTISVLPDELAGCSKLFRLNLEGN 170


>04_01_0516 + 6772617-6773042
          Length = 141

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 531 SCTGTPARAWTRWSSTKQRATSTIW 457
           + T +PA AWT  ++  +R T+T+W
Sbjct: 4   AATSSPAAAWTARTAHARRRTATLW 28


>12_01_0200 -
           1483266-1483956,1484023-1484134,1484659-1484957,
           1485203-1485265,1485721-1486010
          Length = 484

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/28 (35%), Positives = 22/28 (78%)
 Frame = -1

Query: 163 CDLALRPVIRLTXLKVQSNGKKSLLNII 80
           C++ +R V+R+T  K++SN +KS+ +++
Sbjct: 411 CEMDIRIVVRVTREKMESNEEKSIEDLV 438


>08_01_0426 - 3757110-3758405
          Length = 431

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +2

Query: 584 FLDGCRVADKRRRHLQTLGRDVAHGCFHVVGDPLDEEAAVLVLDGEHLLVDLLHGHAA 757
           ++   R+ D+R   +   G+D + GC H + D  D     L  DG    +D+    AA
Sbjct: 204 YVSFARLGDERWTPVAYPGQDCSTGCRHAIYDDADGLFYTLRYDGSVYAIDVPRAAAA 261


>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
          Length = 501

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 453 DTRSLTLLSASLNSISSMPSPVYQCKKALRLNMAENCSDI 572
           + RSL LL A  N +  +P+ + +      LN++ N SD+
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDM 367


>02_01_0485 +
           3487578-3487635,3488281-3488399,3488600-3488698,
           3488795-3488851,3488954-3489109,3489227-3489311,
           3489489-3489579,3489693-3489857,3489923-3490045,
           3490244-3490319,3490486-3490633,3490769-3491934,
           3492041-3492231,3492321-3492513
          Length = 908

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -3

Query: 761 PRPHVHEGGRRADALHPKQEQQLLRRVDPQQRENSRVRHPS--QGSEDVVYVYRQHDSHP 588
           P  H      +   L P+Q+QQ   +  PQ ++  + +H S  Q   + + V+ Q  S P
Sbjct: 517 PLQHCQSFNEQKPQLQPQQQQQESHQQQPQHQQMQQQKHLSNFQTVPNALSVFSQLSSTP 576

Query: 587 GTIQENIRAV 558
            +    ++ V
Sbjct: 577 QSTPSTLQTV 586


>03_05_0401 - 23819230-23819829,23822612-23823194,23823303-23824027
          Length = 635

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 683 LDEEAAVLVLDGEHLLVDLLH 745
           L+EE   LVLD EH+ VD+ H
Sbjct: 486 LEEEERQLVLDKEHVAVDIRH 506


>02_02_0375 +
           9543411-9543872,9547222-9547290,9547382-9547384,
           9548336-9548422,9549027-9549094,9549192-9549333
          Length = 276

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 358 SHGARPAPTPPGLLGRTRCRLPRWPPGTVGTQTPD 462
           SH   P P+   +LGR+  R   WPPG +G+ T D
Sbjct: 227 SHVWGPLPSK-NILGRSIFRY--WPPGRIGSTTTD 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,766,362
Number of Sequences: 37544
Number of extensions: 384081
Number of successful extensions: 1461
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -