Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_C10
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 35 0.083
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 1.0
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81076-8|CAB03056.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 5.5
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 29 5.5
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 7.2
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 7.2
Z81495-7|CAB04060.1| 444|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 28 9.5
U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical pr... 28 9.5
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 9.5
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 34.7 bits (76), Expect = 0.083
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = -2
Query: 584 QKAEPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGKKTITLR 405
+KAE ++S + + SS+ S S D H + + SSS + + +
Sbjct: 247 KKAESSSSSSSSSSSSSSSSSSEDEKHHHKKHAAKKHVKHHKKAASSSSSSSSSSSSSSS 306
Query: 404 KTKNSSIESTMSLPNQKSLEKK-HGGLRHQKAVGAQSDITLTTQTS 270
+ +SS ES +K KK HG H+KA + S + ++ +S
Sbjct: 307 SSSSSSSESEDEKKKKKVHHKKSHGKKHHKKAASSSSSSSSSSSSS 352
Score = 32.3 bits (70), Expect = 0.44
Identities = 33/155 (21%), Positives = 63/155 (40%)
Frame = -2
Query: 569 TTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGKKTITLRKTKNS 390
++S + + SS+ S +S D H + + SSS + + + + +S
Sbjct: 119 SSSSSSSSSSSSSSSESEDEKHHHKKHAKKHLKKHHKKAESSSSSSSSSSSSSSSSSSSS 178
Query: 389 SIESTMSLPNQKSLEKKHGGLRHQKAVGAQSDITLTTQTSITDDRKALREALYQGIFHRH 210
S ES + K KKH H+KA + S + ++ +S + + + + H H
Sbjct: 179 SSESEDEKHHHKKHAKKHLKKHHKKAESSSSS-SSSSSSSSSSSSSSSSSSESEDEKHHH 237
Query: 209 RRTIFAVGSFLRMLRSKTSNYDSIRSDSDEI*HQD 105
++ AV + S +S+ S S S +D
Sbjct: 238 KK--HAVKKHHKKAESSSSSSSSSSSSSSSSSSED 270
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = -2
Query: 602 PKDDMIQKAEPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGK 423
P+ + EP T ++S+A+ Q++ D V P + +PL P S E +P
Sbjct: 594 PEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASPLNPQPPPPPSPSPEPEPEP 653
Query: 422 KTITLRKTKNSSIE 381
K + KN +++
Sbjct: 654 KP-PVTPPKNETVD 666
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -2
Query: 575 EPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGKKTITLRKTK 396
EP +S + +++ I+ P SSN P+ + ++S P T ++ T
Sbjct: 800 EPPSSSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTT 859
Query: 395 NSSIESTMSLPNQKS 351
++ E+T + P S
Sbjct: 860 TTAPETTSTEPPSSS 874
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = -2
Query: 575 EPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGKKTITLRKTK 396
EP +S T +++ + P SSN P+ + ++S P T ++ T
Sbjct: 662 EPPSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTT 721
Query: 395 NSSIESTMSLPNQKS 351
++ E+T + P S
Sbjct: 722 TTAPETTSTEPPSSS 736
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = -2
Query: 575 EPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGKKTITLRKTK 396
EP +S T +++ + P SSN P+ + ++S P T ++ T
Sbjct: 754 EPPSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTT 813
Query: 395 NSSIESTMSLPNQKS 351
++ E+T + P S
Sbjct: 814 ITAPETTSTEPPSSS 828
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -1
Query: 579 GGADNVTKNADSIERHQPKVSGRYRSPR--ELEQSSLQIEARAGQVVVRNPTGQEDDYFE 406
G A+N + A++ E+ Q + + Y + R +LEQ + ++ Q+ R T + +
Sbjct: 309 GLANNSIRQAEA-EKQQLQEANWYANERVGKLEQENGYLKGITEQLKARADTSHAEKMLK 367
Query: 405 ENKKFVNRINDEPSKPE 355
+++K V IN+E SK E
Sbjct: 368 DSEKRVWEINEEKSKLE 384
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -1
Query: 579 GGADNVTKNADSIERHQPKVSGRYRSPR--ELEQSSLQIEARAGQVVVRNPTGQEDDYFE 406
G A+N + A++ E+ Q + + Y + R +LEQ + ++ Q+ R T + +
Sbjct: 309 GLANNSIRQAEA-EKQQLQEANWYANERVGKLEQENGYLKGITEQLKARADTSHAEKMLK 367
Query: 405 ENKKFVNRINDEPSKPE 355
+++K V IN+E SK E
Sbjct: 368 DSEKRVWEINEEKSKLE 384
>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
protein C34F6.9 protein.
Length = 1181
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -1
Query: 642 KQNDRNRS*TAGVAQGRHDPEGGADNVTKNADSIERHQPKVSGRYRSPRELEQSSL 475
K DR S GV PE A N T N I + +PK S + +S E E S+
Sbjct: 621 KSQDRKES--EGVQLNSPLPENHAVNQTVNQSMIRKGRPKRSTKTKSGSETENESM 674
>Z81076-8|CAB03056.1| 385|Caenorhabditis elegans Hypothetical
protein F35C5.7 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = -1
Query: 576 GADNVTKNADSIERHQPKVSGRYRSPRELEQSSLQIEARAGQVVVRNPTGQEDDYFEENK 397
G V N + P++ Y PR S L + A V N DD ++
Sbjct: 48 GITEVAANIATTFASGPRIGTDYSDPRSTRLSILTYNSEATVVADLNQFQSADDVYQTLF 107
Query: 396 KFVNRIND 373
F+N ++D
Sbjct: 108 SFLNEVSD 115
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 686 SSLAHLRIIISLLNTNKMIAIEAEQQALPKDDMIQKAEPTTSQRTLTRSSAISQKS 519
S++A L+ I +LN A+QQ PKD+++ ++E + + +KS
Sbjct: 493 STIAQLKDEIQILNKRLEDEALAQQQQKPKDEIVAESEKKLKELKERNKQLVMEKS 548
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 510 YRSPRELEQSSLQIEARAGQV---VVRNPTGQEDDYFEENKK 394
YR P+E+EQ L E R +V V+ P + DY E KK
Sbjct: 350 YRDPKEVEQEML--EKRLAEVKLDYVKEPKWVDTDYVENKKK 389
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -2
Query: 626 IEAEQQALPKDDMI---QKAEPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAP 456
I A P+D + Q EPTTSQ+ + R++ S+ + E P+ +K AP
Sbjct: 612 IAATSSTEPEDKVTSSEQTPEPTTSQKFIARNTR-SKTKESAVQKVEKPATPV--AKPAP 668
Query: 455 VRSSSETQPGKKTI 414
V E +P K +
Sbjct: 669 VEKEPEERPLKSML 682
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -2
Query: 626 IEAEQQALPKDDMI---QKAEPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAP 456
I A P+D + Q EPTTSQ+ + R++ S+ + E P+ +K AP
Sbjct: 612 IAATSSTEPEDKVTSSEQTPEPTTSQKFIARNTR-SKTKESAVQKVEKPATPV--AKPAP 668
Query: 455 VRSSSETQPGKKTI 414
V E +P K +
Sbjct: 669 VEKEPEERPLKSML 682
>Z81495-7|CAB04060.1| 444|Caenorhabditis elegans Hypothetical
protein F08G2.7 protein.
Length = 444
Score = 27.9 bits (59), Expect = 9.5
Identities = 30/122 (24%), Positives = 49/122 (40%)
Frame = -1
Query: 765 TIRASPRIWPCPLLTSLTRPARRRCDLVSRPSAHYHFIIEHKQNDRNRS*TAGVAQGRHD 586
T R S R P S+ R AR + D + P+A YH + R R +
Sbjct: 29 TSRRSIRAAPSSSSRSMARGARFQDDSMLPPTAAYH---TQNASARVRRGPKSCPGEYIE 85
Query: 585 PEGGADNVTKNADSIERHQPKVSGRYRSPRELEQSSLQIEARAGQVVVRNPTGQEDDYFE 406
E + + + N DS R +P+ R RS ++ +S + + + R + +Y
Sbjct: 86 EEAPSSSRSFNVDSF-RREPR-DQRRRSSNMVQSTSKMTSSSSSRAAPRYQQWETSEYGS 143
Query: 405 EN 400
EN
Sbjct: 144 EN 145
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -1
Query: 633 DRNRS*TAGVAQGRHDPEGGADNVTKN-ADSIERHQPKVSGRYRSPRELEQSSLQIEARA 457
D S GVA G H E DN T N +D+IE VS R + + L+ ++
Sbjct: 473 DETDSGCEGVASGDHPQEFLEDNATINSSDAIEEKPKPVSERMVTINGDDLQLLKAQSYV 532
Query: 456 GQVVVRNPTGQEDDYFEENKKFVNRINDEPSKP 358
+ + + ++ + RI E S P
Sbjct: 533 FSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVP 565
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -1
Query: 633 DRNRS*TAGVAQGRHDPEGGADNVTKN-ADSIERHQPKVSGRYRSPRELEQSSLQIEARA 457
D S GVA G H E DN T N +D+IE VS R + + L+ ++
Sbjct: 597 DETDSGCEGVASGDHPQEFLEDNATINSSDAIEEKPKPVSERMVTINGDDLQLLKAQSYV 656
Query: 456 GQVVVRNPTGQEDDYFEENKKFVNRINDEPSKP 358
+ + + ++ + RI E S P
Sbjct: 657 FSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVP 689
>U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical
protein C14A11.6 protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -2
Query: 410 LRKTKNSSIESTMSLPNQKSLEKKHG-----GLRHQKAVGAQSDITLTTQTSITDDRKAL 246
LR+TK +S+ LPN+K LE+ + ++ +S++ T T I+ + K +
Sbjct: 213 LRRTKKKKKKSSKKLPNRKDLEESEDIESSTHYIYPESRNLKSNLQKLT-TDISTEEKQI 271
Query: 245 REALYQG 225
RE L G
Sbjct: 272 RERLKLG 278
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = -1
Query: 654 IIEHKQNDRNRS*TAGVAQGRHDPEGGADNVTKNADSIERHQPKVSGR-YRSPRELEQSS 478
I EH++N GRH G + ++DS + + K + R ++ E+
Sbjct: 76 IQEHRENRGRHGHHGRHGMGRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKKKQEEED 135
Query: 477 LQIEARAGQVVVRNPTGQEDDYFEE--NKKFVNRINDEPSKPE 355
+ E ++ +EDD EE +KK + ND+ + +
Sbjct: 136 KKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEED 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,157,632
Number of Sequences: 27780
Number of extensions: 337805
Number of successful extensions: 1152
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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