Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_C08
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    26   0.39 
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    26   0.39 
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    26   0.39 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.39 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    26   0.39 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.4  

>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 306 EIAHSLCCTLSNHKLWYNH 250
           EIAH+LC T    K+W+ +
Sbjct: 40  EIAHALCLTERQIKIWFQN 58


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 306 EIAHSLCCTLSNHKLWYNH 250
           EIAH+LC T    K+W+ +
Sbjct: 40  EIAHALCLTERQIKIWFQN 58


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 306 EIAHSLCCTLSNHKLWYNH 250
           EIAH+LC T    K+W+ +
Sbjct: 40  EIAHALCLTERQIKIWFQN 58


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 306 EIAHSLCCTLSNHKLWYNH 250
           EIAH+LC T    K+W+ +
Sbjct: 302 EIAHALCLTERQIKIWFQN 320


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 564 ESSSTHLSNRKNVEKGLSHFVSSGI 490
           +S+S  + + K ++  LSHF+ SGI
Sbjct: 40  DSNSDGIGDLKGIKDKLSHFIESGI 64


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 396 LNNTEHRCCKDKDKDVY 346
           + NTE++ C D D + Y
Sbjct: 184 MENTENKSCTDSDIEKY 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,766
Number of Sequences: 438
Number of extensions: 4410
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)