Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_B08
         (346 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1113 - 24068441-24068923                                         28   1.7  
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554...    27   3.9  
06_01_0486 - 3455030-3455770                                           27   3.9  
11_03_0044 - 9198016-9199143,9199579-9199674,9199771-9199846,920...    27   5.2  
07_03_0437 + 18197454-18197516,18198025-18198078,18198557-18198787     27   5.2  
01_06_1377 + 36764461-36765339                                         27   5.2  
11_03_0107 + 10084234-10084348,10084830-10084834,10085351-100858...    26   6.9  
01_07_0359 - 43042675-43042758,43042956-43043024,43043099-430431...    26   6.9  
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686...    26   9.1  

>07_03_1113 - 24068441-24068923
          Length = 160

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 204 KKLRCWFWGCLRAWSGQRHGQQSE 275
           KK R W WGC     G  HG++SE
Sbjct: 63  KKQRLWRWGC----GGSPHGEESE 82


>06_03_1058 +
           27254195-27254382,27255041-27255116,27255254-27255418,
           27255580-27255671,27255713-27255754,27256342-27256387,
           27258456-27258683
          Length = 278

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 180 DVVQACVWKKLRCWFWGCLRAWSGQRHG-QQSEEN 281
           + ++ C+ + + C  WG L+ WS    G QQ  EN
Sbjct: 173 ECIRPCMSRTISCAAWGELQLWSSLPVGEQQMSEN 207


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = -3

Query: 203 PYTGLDYVYTPGLVPPVISPYASPAAVPITYSALPSAT 90
           PY      Y P  +PP   PY  P   P T   +P  T
Sbjct: 91  PYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPT 128


>11_03_0044 -
           9198016-9199143,9199579-9199674,9199771-9199846,
           9200330-9200547,9200703-9200918,9201336-9201521,
           9201607-9201708,9201828-9202495,9203248-9203314
          Length = 918

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 200 YTGLDYVYTPGLVPPVIS 147
           Y GL  V+TP L+ PVIS
Sbjct: 78  YVGLSTVHTPALLTPVIS 95


>07_03_0437 + 18197454-18197516,18198025-18198078,18198557-18198787
          Length = 115

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 189 QACVWKKLRCWFWG 230
           Q  V +K RCWFWG
Sbjct: 21  QGVVKEKNRCWFWG 34


>01_06_1377 + 36764461-36765339
          Length = 292

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 173 PGLVPPVISPYASPAAVPITYSALPSATY 87
           P   PP  SPY  P   P  YSA P   Y
Sbjct: 160 PQYPPPSSSPYYFPPPPPPAYSAPPPPQY 188


>11_03_0107 +
           10084234-10084348,10084830-10084834,10085351-10085803,
           10086143-10086267,10087282-10087345,10087452-10087508,
           10088475-10088485,10089923-10090802
          Length = 569

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -3

Query: 197 TGLDYV------YTPGLVPPVISPYASPAAVPIT 114
           TGL Y+      YTP L PP  +P A+ AA   T
Sbjct: 38  TGLGYIVLALQAYTPSLHPPPCNPAATTAAASTT 71


>01_07_0359 -
           43042675-43042758,43042956-43043024,43043099-43043159,
           43043260-43043768,43044545-43045153,43045697-43045972,
           43046581-43046769,43047006-43047116,43047621-43047908,
           43047990-43048041,43048648-43048824,43049249-43049314,
           43049675-43049929,43050071-43050577,43050807-43050886,
           43050974-43051207
          Length = 1188

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = -3

Query: 149 SPYASPAAVPITYSALPS---ATYYVR*NKIISRHL*K 45
           SP++S AA PIT  A PS   +  YVR   +++RH+ K
Sbjct: 139 SPHSSVAAPPITNFASPSLVKSLNYVR--SLVARHIPK 174


>05_06_0093 -
           25468271-25468320,25468393-25468433,25468592-25468653,
           25468872-25469057
          Length = 112

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 191 LDYVYTPGLVPPVISPYASPAAVPITYSA 105
           +D +Y   ++P V+ P+ S  ++ +TY++
Sbjct: 1   MDPLYLSQIIPDVLDPFISTISLRVTYNS 29


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,420,373
Number of Sequences: 37544
Number of extensions: 147429
Number of successful extensions: 528
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)