Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_B08
         (346 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035596-1|AAH35596.1|  681|Homo sapiens PAK6 protein protein.         31   1.3  
AJ236915-1|CAC18720.1|  681|Homo sapiens pak5 protein protein.         31   1.3  
AF276893-1|AAF82800.1|  681|Homo sapiens p21-activated protein k...    31   1.3  
AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens ...    29   3.9  
BC094707-1|AAH94707.1|  106|Homo sapiens SMR3B protein protein.        28   9.0  
AK001267-1|BAA91590.1|  639|Homo sapiens protein ( Homo sapiens ...    28   9.0  
AC093727-1|AAX81992.1|  639|Homo sapiens unknown protein.              28   9.0  

>BC035596-1|AAH35596.1|  681|Homo sapiens PAK6 protein protein.
          Length = 681

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = -2

Query: 315 TRNKQHVQQILRFLRSVGRVSGRSKP*GSPRT---STATSSIHRP 190
           T +    Q+ LR   + G++ GRS P GSPRT     +TS+++ P
Sbjct: 323 TSDTSSPQKSLRTAPATGQLPGRSSPAGSPRTWHAQISTSNLYLP 367


>AJ236915-1|CAC18720.1|  681|Homo sapiens pak5 protein protein.
          Length = 681

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = -2

Query: 315 TRNKQHVQQILRFLRSVGRVSGRSKP*GSPRT---STATSSIHRP 190
           T +    Q+ LR   + G++ GRS P GSPRT     +TS+++ P
Sbjct: 323 TSDTSSPQKSLRTAPATGQLPGRSSPAGSPRTWHAQISTSNLYLP 367


>AF276893-1|AAF82800.1|  681|Homo sapiens p21-activated protein
           kinase 6 protein.
          Length = 681

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = -2

Query: 315 TRNKQHVQQILRFLRSVGRVSGRSKP*GSPRT---STATSSIHRP 190
           T +    Q+ LR   + G++ GRS P GSPRT     +TS+++ P
Sbjct: 323 TSDTSSPQKSLRTAPATGQLPGRSSPAGSPRTWHAQISTSNLYLP 367


>AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22184 fis, clone HRC00983. ).
          Length = 616

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 179 YTPGLVPPVISPYASPAAVPITYSALP 99
           ++P   PPV +P++ PA+ P++ SA P
Sbjct: 157 FSPPPSPPVQAPFSPPASPPVSPSATP 183


>BC094707-1|AAH94707.1|  106|Homo sapiens SMR3B protein protein.
          Length = 106

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -3

Query: 179 YTPGLVPPVISPYASPAAVPITYSALPSATYYVR*NKIISRH 54
           + PG VPP   P   P  +P  YS  P+     R +    RH
Sbjct: 41  FGPGFVPPPPPPPYGPGRIPPPYSCTPNMNNCSRCHHHHKRH 82


>AK001267-1|BAA91590.1|  639|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10405 fis, clone NT2RM4000496, weakly similar to
           SAP1 PROTEIN. ).
          Length = 639

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 203 PYTGLDYVYTPGLVPPVISPY---ASPAAVPITYSALPSATY 87
           P T +   Y+PG  PP  S Y     PA  P+  + +P  TY
Sbjct: 134 PQTAVGSGYSPGGAPPPPSAYLPSGIPAPTPLPPTTVPGYTY 175


>AC093727-1|AAX81992.1|  639|Homo sapiens unknown protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 203 PYTGLDYVYTPGLVPPVISPY---ASPAAVPITYSALPSATY 87
           P T +   Y+PG  PP  S Y     PA  P+  + +P  TY
Sbjct: 134 PQTAVGSGYSPGGAPPPPSAYLPSGIPAPTPLPPTTVPGYTY 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,957,549
Number of Sequences: 237096
Number of extensions: 801569
Number of successful extensions: 6057
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6057
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)