Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_A24
         (604 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036447-1|AAH36447.1|  686|Homo sapiens rhophilin, Rho GTPase b...    30   5.4  
AL831950-1|CAD38597.1|  657|Homo sapiens hypothetical protein pr...    30   5.4  
AJ347750-1|CAC87939.1|  686|Homo sapiens p76RBE protein protein.       30   5.4  
AF423421-1|AAQ04062.1|  686|Homo sapiens rhophilin-like Rho-GTPa...    30   5.4  
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.     30   7.2  
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr...    30   7.2  
AB067494-1|BAB67800.1| 1737|Homo sapiens KIAA1907 protein protein.     30   7.2  

>BC036447-1|AAH36447.1|  686|Homo sapiens rhophilin, Rho GTPase
           binding protein 2 protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 558 FPELCHMSLLFXWYYLXTNLPTMAKNIKXVYLFIYLFTTRRTNSPLGQ*CNK 403
           FP    M LLF WY   T +P   +N+      + LF T    + +G  C++
Sbjct: 186 FPPTRQMGLLFTWYDSLTGVPVSQQNLLLEKASV-LFNTGALYTQIGTRCDR 236


>AL831950-1|CAD38597.1|  657|Homo sapiens hypothetical protein
           protein.
          Length = 657

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 558 FPELCHMSLLFXWYYLXTNLPTMAKNIKXVYLFIYLFTTRRTNSPLGQ*CNK 403
           FP    M LLF WY   T +P   +N+      + LF T    + +G  C++
Sbjct: 157 FPPTRQMGLLFTWYDSLTGVPVSQQNLLLEKASV-LFNTGALYTQIGTRCDR 207


>AJ347750-1|CAC87939.1|  686|Homo sapiens p76RBE protein protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 558 FPELCHMSLLFXWYYLXTNLPTMAKNIKXVYLFIYLFTTRRTNSPLGQ*CNK 403
           FP    M LLF WY   T +P   +N+      + LF T    + +G  C++
Sbjct: 186 FPPTRQMGLLFTWYDSLTGVPVSQQNLLLEKASV-LFNTGALYTQIGTRCDR 236


>AF423421-1|AAQ04062.1|  686|Homo sapiens rhophilin-like Rho-GTPase
           binding protein protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 558 FPELCHMSLLFXWYYLXTNLPTMAKNIKXVYLFIYLFTTRRTNSPLGQ*CNK 403
           FP    M LLF WY   T +P   +N+      + LF T    + +G  C++
Sbjct: 186 FPPTRQMGLLFTWYDSLTGVPVSQQNLLLEKASV-LFNTGALYTQIGTRCDR 236


>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
          Length = 3690

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 554 PSCVTCHCSSXGTIX*PICPR 492
           PSCV CHCS+ G++     PR
Sbjct: 672 PSCVPCHCSAEGSLHAACDPR 692


>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
           precursor protein.
          Length = 3695

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 554 PSCVTCHCSSXGTIX*PICPR 492
           PSCV CHCS+ G++     PR
Sbjct: 672 PSCVPCHCSAEGSLHAACDPR 692


>AB067494-1|BAB67800.1| 1737|Homo sapiens KIAA1907 protein protein.
          Length = 1737

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 554 PSCVTCHCSSXGTIX*PICPR 492
           PSCV CHCS+ G++     PR
Sbjct: 475 PSCVPCHCSAEGSLHAACDPR 495


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,631,184
Number of Sequences: 237096
Number of extensions: 1064954
Number of successful extensions: 1979
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)