Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_A17
(420 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 119 3e-27
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 119 3e-27
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 119 3e-27
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 119 3e-27
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 119 3e-27
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 119 3e-27
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 119 3e-27
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 64 2e-10
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 53 5e-07
BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein. 31 1.2
AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein. 31 1.2
AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal... 31 1.2
AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal... 31 1.2
AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal... 31 1.2
BC112112-1|AAI12113.1| 656|Homo sapiens coiled-coil domain cont... 31 2.1
BC112108-1|AAI12109.1| 656|Homo sapiens hypothetical protein LO... 31 2.1
AK057387-1|BAB71462.1| 656|Homo sapiens protein ( Homo sapiens ... 30 2.7
AL365330-1|CAI42526.1| 656|Homo sapiens novel protein protein. 30 3.6
AL136528-1|CAI19122.1| 656|Homo sapiens novel protein protein. 30 3.6
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 119 bits (287), Expect = 3e-27
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = -2
Query: 368 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 189
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 188 YHQKMKVXLRNHYXYKKYKPLDLRAXKTRAMRKALTKHEAXIKTRKEIRKKSLFP 24
+Q K LR Y KKYKPLDLR KTRAMR+ L KHE +KT+K+ RK+ L+P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/71 (52%), Positives = 42/71 (59%)
Frame = -2
Query: 362 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 183
K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V +
Sbjct: 2 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 61
Query: 182 QKMKVXLRNHY 150
Q K LR Y
Sbjct: 62 QTQKENLRKFY 72
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 52.8 bits (121), Expect = 5e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -2
Query: 278 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 180
LRVAKVTGG ASKLSKIRVVRK+IARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein.
Length = 128
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -2
Query: 248 ASKLSKIRVVRKAIARVYIVYHQKMKVXLRNHYXYKKYK-----PLDLRAXKTRAMRKAL 84
+S+ S RV R+A AR+Y V K H Y++ + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTI-HIRYREPRRMLAMPIDLDTLSPEERRARL 93
Query: 83 TKHEAXIKTRKEIRKK 36
K EA +++RKE ++
Sbjct: 94 RKREAQLQSRKEYEQE 109
>AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein.
Length = 164
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -2
Query: 248 ASKLSKIRVVRKAIARVYIVYHQKMKVXLRNHYXYKKYK-----PLDLRAXKTRAMRKAL 84
+S+ S RV R+A AR+Y V K H Y++ + P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTI-HIRYREPRRMLAMPIDLDTLSPEERRARL 129
Query: 83 TKHEAXIKTRKEIRKK 36
K EA +++RKE ++
Sbjct: 130 RKREAQLQSRKEYEQE 145
>AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 164
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -2
Query: 248 ASKLSKIRVVRKAIARVYIVYHQKMKVXLRNHYXYKKYK-----PLDLRAXKTRAMRKAL 84
+S+ S RV R+A AR+Y V K H Y++ + P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTI-HIRYREPRRMLAMPIDLDTLSPEERRARL 129
Query: 83 TKHEAXIKTRKEIRKK 36
K EA +++RKE ++
Sbjct: 130 RKREAQLQSRKEYEQE 145
>AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 125
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -2
Query: 248 ASKLSKIRVVRKAIARVYIVYHQKMKVXLRNHYXYKKYK-----PLDLRAXKTRAMRKAL 84
+S+ S RV R+A AR+Y V K H Y++ + P+DL R L
Sbjct: 32 SSRASLTRVHRQAYARLYPVLLVKQDGSTI-HIRYREPRRMLAMPIDLDTLSPEERRARL 90
Query: 83 TKHEAXIKTRKEIRKK 36
K EA +++RKE ++
Sbjct: 91 RKREAQLQSRKEYEQE 106
>AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 128
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -2
Query: 248 ASKLSKIRVVRKAIARVYIVYHQKMKVXLRNHYXYKKYK-----PLDLRAXKTRAMRKAL 84
+S+ S RV R+A AR+Y V K H Y++ + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTI-HIRYREPRRMLAMPIDLDTLSPEERRARL 93
Query: 83 TKHEAXIKTRKEIRKK 36
K EA +++RKE ++
Sbjct: 94 RKREAQLQSRKEYEQE 109
>BC112112-1|AAI12113.1| 656|Homo sapiens coiled-coil domain
containing 27 protein.
Length = 656
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 180 EDEGXS*KPLXIQEIQAFRFKSXEDPCYAQGSY*TRSXDQDEERDQKEISLPTXESMP 7
EDEG +P ++++ A+ S + +GS + D + D +E LP E +P
Sbjct: 339 EDEGLEGEPDGVEDMGAWGGVSQMGSVHEEGSEEEEEEEGDRDEDSEERELPEEEEIP 396
>BC112108-1|AAI12109.1| 656|Homo sapiens hypothetical protein
LOC148870 protein.
Length = 656
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 180 EDEGXS*KPLXIQEIQAFRFKSXEDPCYAQGSY*TRSXDQDEERDQKEISLPTXESMP 7
EDEG +P ++++ A+ S + +GS + D + D +E LP E +P
Sbjct: 339 EDEGLEGEPDGVEDMGAWGGVSQMGSVHEEGSEEEEEEEGDRDEDSEERELPEEEEIP 396
>AK057387-1|BAB71462.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ32825 fis, clone TESTI2003074, weakly similar to
TRICHOHYALIN. ).
Length = 656
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 180 EDEGXS*KPLXIQEIQAFRFKSXEDPCYAQGSY*TRSXDQDEERDQKEISLPTXESMP 7
EDEG +P +++ A+ S + +GS + D++ D +E LP E +P
Sbjct: 339 EDEGLEGEPDGVEDTGAWGGVSQMGSVHEEGSEEEEEEEGDKDEDSEERELPEEEEIP 396
>AL365330-1|CAI42526.1| 656|Homo sapiens novel protein protein.
Length = 656
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 180 EDEGXS*KPLXIQEIQAFRFKSXEDPCYAQGSY*TRSXDQDEERDQKEISLPTXESMP 7
EDEG +P +++ A+ S + +GS + D + D +E LP E +P
Sbjct: 339 EDEGLEGEPDGVEDTGAWGGVSQMGSVHEEGSEEEEEEEGDRDEDSEERELPEEEEIP 396
>AL136528-1|CAI19122.1| 656|Homo sapiens novel protein protein.
Length = 656
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 180 EDEGXS*KPLXIQEIQAFRFKSXEDPCYAQGSY*TRSXDQDEERDQKEISLPTXESMP 7
EDEG +P +++ A+ S + +GS + D + D +E LP E +P
Sbjct: 339 EDEGLEGEPDGVEDTGAWGGVSQMGSVHEEGSEEEEEEEGDRDEDSEERELPEEEEIP 396
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,471,472
Number of Sequences: 237096
Number of extensions: 677169
Number of successful extensions: 1138
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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