Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_A07
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 98 5e-23
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.8
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 98.3 bits (234), Expect = 5e-23
Identities = 45/99 (45%), Positives = 63/99 (63%)
Frame = -2
Query: 398 APVVKSSYDITPEGHFQFNYETGNGIYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDGQPI 219
A + ++ +G++ N+ET NGI Q G K V++E P + +G+ YT+PDGQ +
Sbjct: 27 AVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDGQQV 85
Query: 218 DLAYVADENGYQPQGSHLPTPHPIPEAIARALAYIEAHP 102
+ YVADENG+Q QGSH+PT PIP I RAL + AHP
Sbjct: 86 SITYVADENGFQVQGSHIPTAPPIPPEIQRALEWNAAHP 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -1
Query: 156 SPNSRGDRPR---SCLHRGPPPQPL 91
SP+S D R SCL GPP PL
Sbjct: 420 SPSSLADGARFGGSCLIHGPPLPPL 444
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -1
Query: 156 SPNSRGDRPR---SCLHRGPPPQPL 91
SP+S D R SCL GPP PL
Sbjct: 420 SPSSLADGARFGGSCLIHGPPLPPL 444
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -3
Query: 382 PATTSPLKATSSSTTRPATEFTPRLKVPSRTSTQNTPP 269
PATT T+++TT T T S PP
Sbjct: 654 PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPP 691
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 236 PDGQP-IDLAYVADENGYQPQGSHLPTPHPIPEAIARA 126
P+ P +DL+ + G GS T P P +I+RA
Sbjct: 1369 PERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRA 1406
Score = 21.8 bits (44), Expect = 5.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 620 RPVRKCYFC 594
+P+ KCYFC
Sbjct: 422 KPLDKCYFC 430
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 367 PLKATSSSTTRPATEFTPRLKVPSRTST 284
PL +SST+ PAT T + T+T
Sbjct: 93 PLHPPASSTSLPATITTTTTTTTTTTAT 120
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 289 STQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 179
S N +K+ + LP+ DNP S +L NP
Sbjct: 293 SRMNLTLAKMEKTSKPLPMVDNPE-STGNLVYIYNNP 328
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -2
Query: 305 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 216
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -2
Query: 305 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 216
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 304 VPSRTSTQNTPPSKLRVPTSTLP 236
+P S TP S + P TLP
Sbjct: 654 LPRPISCHTTPDSFIEAPNKTLP 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -2
Query: 305 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 216
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.0 bits (42), Expect = 9.8
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = -3
Query: 364 LKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP 221
L AT +FT P + TP PT PL NP
Sbjct: 178 LLATVVQAHLDTCDFTRDKVAPILVRARETPNYTACPPTLACPLNPNP 225
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,937
Number of Sequences: 438
Number of extensions: 3643
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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