Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_A02
(764 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 4.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 80 REHRRDTPPTPAPHTRTCTPRT 15
R+H + P PH TCT T
Sbjct: 1073 RQHTAEGVPEQPPHDTTCTTLT 1094
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -1
Query: 764 DGEQRRHXDAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 600
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +1
Query: 181 VKTLDP*SVYIFVWLTKKKNCIFSILQFFVHHQQLMYKKLRFQRKICTVRFYV 339
+ +++P +VY ++ K+ + LQF V H L ++ L + K + Y+
Sbjct: 33 INSINPINVYTKAYIYTIKSNMAKTLQFDV-HMMLQFRYLDARLKFSNIAPYL 84
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.2
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 740 DAQKNLRKSERRIKELTFQAE---EDRKNHERMQDLVDKLQQKIK 615
D + RK +RR ++L + E E+R + ER ++ Q+ K
Sbjct: 240 DRNREYRKKDRRYEKLHNEKEKLLEERTSRERYSRSREREQKSYK 284
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,569
Number of Sequences: 438
Number of extensions: 3809
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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