Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_P24
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 7.5
U64852-3|ABH03525.1| 740|Caenorhabditis elegans Uncoordinated p... 27 7.5
U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated p... 27 7.5
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 27 7.5
U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1 (de... 27 7.5
U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1 (de... 27 7.5
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 27 7.5
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -1
Query: 288 NFDIMLPAIKFP*YDWAEAAMLPAIIPDALKPSRGATIGIKNPPMQR 148
NF IM P +++ + W+ + ++ L+ +RG T + + P++R
Sbjct: 465 NFHIMAPTLEYNTHPWSWSPCSAGMLERFLENNRGQTQCLFDQPVER 511
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -1
Query: 288 NFDIMLPAIKFP*YDWAEAAMLPAIIPDALKPSRGATIGIKNPPMQR 148
NF IM P +++ + W+ + ++ L+ +RG T + + P++R
Sbjct: 465 NFHIMAPTLEYNTHPWSWSPCSAGMLERFLENNRGQTQCLFDQPVER 511
>U64852-3|ABH03525.1| 740|Caenorhabditis elegans Uncoordinated
protein 83, isoform c protein.
Length = 740
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = -3
Query: 256 PVIRLG*SCNASRHYSRCAEAEQRCHDWDQKPSHAKNGSAYDVDY*GSEKSHDP*VTVTS 77
P+IR+ R R + + R D D P H+ AY+ D + D S
Sbjct: 290 PMIRVSPPSTPVRRLLRKLDEQIRNRDSDTAPEHSDAAQAYEWDEYNPPQKDDS----IS 345
Query: 76 HRDIQYKLTLDNLYLFIDQQFLDN 5
R IQ + + + ID F ++
Sbjct: 346 DRHIQTMTDISDQLMNIDDDFAEH 369
>U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated
protein 83, isoform b protein.
Length = 975
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = -3
Query: 256 PVIRLG*SCNASRHYSRCAEAEQRCHDWDQKPSHAKNGSAYDVDY*GSEKSHDP*VTVTS 77
P+IR+ R R + + R D D P H+ AY+ D + D S
Sbjct: 525 PMIRVSPPSTPVRRLLRKLDEQIRNRDSDTAPEHSDAAQAYEWDEYNPPQKDDS----IS 580
Query: 76 HRDIQYKLTLDNLYLFIDQQFLDN 5
R IQ + + + ID F ++
Sbjct: 581 DRHIQTMTDISDQLMNIDDDFAEH 604
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = -3
Query: 256 PVIRLG*SCNASRHYSRCAEAEQRCHDWDQKPSHAKNGSAYDVDY*GSEKSHDP*VTVTS 77
P+IR+ R R + + R D D P H+ AY+ D + D S
Sbjct: 591 PMIRVSPPSTPVRRLLRKLDEQIRNRDSDTAPEHSDAAQAYEWDEYNPPQKDDS----IS 646
Query: 76 HRDIQYKLTLDNLYLFIDQQFLDN 5
R IQ + + + ID F ++
Sbjct: 647 DRHIQTMTDISDQLMNIDDDFAEH 670
>U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform a protein.
Length = 839
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +1
Query: 163 VFDPNRGTSARLQRIGNNGGKH----CSFSPVVLREFNGRKHYIK 285
+FDPN+ T + ++G + C F P+ L RK YI+
Sbjct: 578 MFDPNKITLLDMAKLGTKARFNTLGLCFFHPIFLANSTSRKFYIQ 622
>U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform b protein.
Length = 842
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +1
Query: 163 VFDPNRGTSARLQRIGNNGGKH----CSFSPVVLREFNGRKHYIK 285
+FDPN+ T + ++G + C F P+ L RK YI+
Sbjct: 581 MFDPNKITLLDMAKLGTKARFNTLGLCFFHPIFLANSTSRKFYIQ 625
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = -3
Query: 256 PVIRLG*SCNASRHYSRCAEAEQRCHDWDQKPSHAKNGSAYDVDY*GSEKSHDP*VTVTS 77
P+IR+ R R + + R D D P H+ AY+ D + D S
Sbjct: 591 PMIRVSPPSTPVRRLLRKLDEQIRNRDSDTAPEHSDAAQAYEWDEYNPPQKDDS----IS 646
Query: 76 HRDIQYKLTLDNLYLFIDQQFLDN 5
R IQ + + + ID F ++
Sbjct: 647 DRHIQTMTDISDQLMNIDDDFAEH 670
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,351,153
Number of Sequences: 27780
Number of extensions: 190311
Number of successful extensions: 390
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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