Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_P23
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein. 158 2e-38
BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence ... 158 2e-38
AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence ... 158 2e-38
AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant prot... 158 2e-38
AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein. 158 2e-38
AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein. 158 2e-38
BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein. 63 1e-09
BC049203-1|AAH49203.1| 657|Homo sapiens solute carrier family 4... 33 1.3
AL590368-3|CAH73436.1| 654|Homo sapiens solute carrier family 4... 33 1.3
AL590368-2|CAH73435.1| 652|Homo sapiens solute carrier family 4... 33 1.3
AL590368-1|CAH73434.1| 657|Homo sapiens solute carrier family 4... 33 1.3
AL450265-3|CAI14397.1| 654|Homo sapiens solute carrier family 4... 33 1.3
AL450265-2|CAI14396.1| 652|Homo sapiens solute carrier family 4... 33 1.3
AL450265-1|CAI14395.1| 657|Homo sapiens solute carrier family 4... 33 1.3
AL161627-3|CAI13071.1| 654|Homo sapiens solute carrier family 4... 33 1.3
AL161627-2|CAI13070.1| 652|Homo sapiens solute carrier family 4... 33 1.3
AL161627-1|CAI13069.1| 657|Homo sapiens solute carrier family 4... 33 1.3
AJ420812-1|CAD12764.1| 657|Homo sapiens choline transporter-lik... 33 1.3
AJ272365-1|CAC82175.1| 652|Homo sapiens CD92 protein protein. 33 1.3
AJ245620-1|CAB75541.2| 654|Homo sapiens choline transporter-lik... 33 1.3
CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein pr... 33 1.8
BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein. 32 3.1
AK022688-1|BAB14180.1| 651|Homo sapiens protein ( Homo sapiens ... 32 3.1
AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein. 32 3.1
>D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein.
Length = 299
Score = 158 bits (384), Expect = 2e-38
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 AGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKMIETVSLSNGLAWDLKEKAFYYTDSMQ 690
AGTM E P ER++ +LY L D ++K + V +SNGL W L K FYY DS+
Sbjct: 115 AGTMAEETAPAVLERHQGALYSL--FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 172
Query: 691 FSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+S+ FDYD+ TG+ISN R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 173 YSVDAFDYDLQTGQISNRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 227
>BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 158 bits (384), Expect = 2e-38
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 AGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKMIETVSLSNGLAWDLKEKAFYYTDSMQ 690
AGTM E P ER++ +LY L D ++K + V +SNGL W L K FYY DS+
Sbjct: 115 AGTMAEETAPAVLERHQGALYSL--FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 172
Query: 691 FSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+S+ FDYD+ TG+ISN R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 173 YSVDAFDYDLQTGQISNRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 227
>AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 158 bits (384), Expect = 2e-38
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 AGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKMIETVSLSNGLAWDLKEKAFYYTDSMQ 690
AGTM E P ER++ +LY L D ++K + V +SNGL W L K FYY DS+
Sbjct: 115 AGTMAEETAPAVLERHQGALYSL--FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 172
Query: 691 FSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+S+ FDYD+ TG+ISN R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 173 YSVDAFDYDLQTGQISNRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 227
>AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant
protein.
Length = 299
Score = 158 bits (384), Expect = 2e-38
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 AGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKMIETVSLSNGLAWDLKEKAFYYTDSMQ 690
AGTM E P ER++ +LY L D ++K + V +SNGL W L K FYY DS+
Sbjct: 115 AGTMAEETAPAVLERHQGALYSL--FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 172
Query: 691 FSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+S+ FDYD+ TG+ISN R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 173 YSVDAFDYDLQTGQISNRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 227
>AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 158 bits (384), Expect = 2e-38
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 AGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKMIETVSLSNGLAWDLKEKAFYYTDSMQ 690
AGTM E P ER++ +LY L D ++K + V +SNGL W L K FYY DS+
Sbjct: 115 AGTMAEETAPAVLERHQGALYSL--FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 172
Query: 691 FSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+S+ FDYD+ TG+ISN R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 173 YSVDAFDYDLQTGQISNRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 227
>AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 158 bits (384), Expect = 2e-38
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 AGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKMIETVSLSNGLAWDLKEKAFYYTDSMQ 690
AGTM E P ER++ +LY L D ++K + V +SNGL W L K FYY DS+
Sbjct: 115 AGTMAEETAPAVLERHQGALYSL--FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 172
Query: 691 FSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+S+ FDYD+ TG+ISN R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 173 YSVDAFDYDLQTGQISNRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 227
>BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein.
Length = 227
Score = 62.9 bits (146), Expect = 1e-09
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +1
Query: 154 SVRIEKIT-EPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 330
S++IE + E GE P W+E +L FV I K + ++ T++ + ++D V +
Sbjct: 3 SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVA 62
Query: 331 PVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLF 510
+ + +V + KF + W + AV+ L VD D+ NNR NDGK DP GR F
Sbjct: 63 LRQ--SGGYVATIGTKFCALNWKEQS----AVV--LATVDNDKKNNRFNDGKVDPAGRYF 114
Query: 511 A 513
A
Sbjct: 115 A 115
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = +1
Query: 736 SNPRNIFDFKQRGLQGIPDGTTIDTDGXLW-----GGRVWRL 846
+N R+++ ++ + IPDG ID +G LW GGRV RL
Sbjct: 116 ANRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRL 155
>BC049203-1|AAH49203.1| 657|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 657
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL590368-3|CAH73436.1| 654|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 654
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL590368-2|CAH73435.1| 652|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 652
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL590368-1|CAH73434.1| 657|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 657
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL450265-3|CAI14397.1| 654|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 654
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL450265-2|CAI14396.1| 652|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 652
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL450265-1|CAI14395.1| 657|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 657
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL161627-3|CAI13071.1| 654|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 654
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL161627-2|CAI13070.1| 652|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 652
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AL161627-1|CAI13069.1| 657|Homo sapiens solute carrier family 44,
member 1 protein.
Length = 657
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AJ420812-1|CAD12764.1| 657|Homo sapiens choline transporter-like
protein 1, splice variant a protein.
Length = 657
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AJ272365-1|CAC82175.1| 652|Homo sapiens CD92 protein protein.
Length = 652
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>AJ245620-1|CAB75541.2| 654|Homo sapiens choline transporter-like
protein protein.
Length = 654
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 461 LITGLMMAKQILVGGCLLELWVMKILQVTLR 553
LI+G+M +K+I++G CLL L + IL V +R
Sbjct: 204 LISGVMTSKEIILGLCLLSLVLSMILMVIIR 234
>CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein
protein.
Length = 313
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +1
Query: 265 KYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGE 444
K V T K K L GF E +E + +F + G + KELG+
Sbjct: 158 KAVTTKIKTDKRDLIKLKGFCTAKETINRTNRQPIEWEKIFTNYASNKGLISRIYKELGQ 217
Query: 445 VDKDRPNNRINDGKAD 492
DK RPNN I D
Sbjct: 218 SDKQRPNNPIKKWAKD 233
>BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.
Length = 1131
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 815 PSVSMVVPSGMPCRPRCLKSNMFLGLDISPVS 720
P VS V+P G P RP L+ N +G +I PV+
Sbjct: 548 PVVSGVLPVGQPVRPGVLQLNQTVGTNILPVN 579
>AK022688-1|BAB14180.1| 651|Homo sapiens protein ( Homo sapiens
cDNA FLJ12626 fis, clone NT2RM4001810, weakly similar to
AGGRECAN CORE PROTEIN PRECURSOR. ).
Length = 651
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 815 PSVSMVVPSGMPCRPRCLKSNMFLGLDISPVS 720
P VS V+P G P RP L+ N +G +I PV+
Sbjct: 68 PVVSGVLPVGQPVRPGVLQLNQTVGTNILPVN 99
>AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.
Length = 1181
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 815 PSVSMVVPSGMPCRPRCLKSNMFLGLDISPVS 720
P VS V+P G P RP L+ N +G +I PV+
Sbjct: 598 PVVSGVLPVGQPVRPGVLQLNQTVGTNILPVN 629
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,329,335
Number of Sequences: 237096
Number of extensions: 2903807
Number of successful extensions: 13554
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13535
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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