Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P20
         (814 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05279-1|CAA28890.2|  639|Drosophila melanogaster protein kinase...    29   5.7  
X05076-1|CAA28736.1|  639|Drosophila melanogaster protein ( Dros...    29   5.7  
BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p pro...    29   10.0 
AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-P...    29   10.0 

>X05279-1|CAA28890.2|  639|Drosophila melanogaster protein kinase C
           protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 253 ETKTYATRHRFGYK*ISNRHLCTDSPPFFPH*KHWKNSPFITNTSHR 113
           + + +    R  ++ I NR +    PPF P  KH K  P +T++SH+
Sbjct: 592 DVRLHPFSRRIDWEKIENREV---QPPFKPKIKHRKMCPTLTSSSHQ 635


>X05076-1|CAA28736.1|  639|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for protein kinase C (PKC).
           ).
          Length = 639

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 253 ETKTYATRHRFGYK*ISNRHLCTDSPPFFPH*KHWKNSPFITNTSHR 113
           + + +    R  ++ I NR +    PPF P  KH K  P +T++SH+
Sbjct: 592 DVRLHPFSRRIDWEKIENREV---QPPFKPKIKHRKMCPTLTSSSHQ 635


>BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p
           protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 QVTITNLFIAEPVSCCICFRFYSCSG 268
           QVT T + +  P+ C IC  FY+C G
Sbjct: 269 QVTGTGIHVITPIVCTIC-TFYTCVG 293


>AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-PA
           protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 QVTITNLFIAEPVSCCICFRFYSCSG 268
           QVT T + +  P+ C IC  FY+C G
Sbjct: 269 QVTGTGIHVITPIVCTIC-TFYTCVG 293


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,062,164
Number of Sequences: 53049
Number of extensions: 681612
Number of successful extensions: 1414
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)