Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P18
         (369 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q810P4 Cluster: Slc36a3 protein (Solute carrier family ...    32   3.8  
UniRef50_Q9XVI2 Cluster: Putative uncharacterized protein sys-1;...    31   5.1  
UniRef50_Q54WL8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_UPI0000F210FE Cluster: PREDICTED: hypothetical protein;...    31   8.9  
UniRef50_A5W4I6 Cluster: Putative uncharacterized protein; n=2; ...    31   8.9  
UniRef50_Q54F20 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  

>UniRef50_Q810P4 Cluster: Slc36a3 protein (Solute carrier family 36
           (Proton\/amino acid symporter), member 3); n=2;
           Murinae|Rep: Slc36a3 protein (Solute carrier family 36
           (Proton\/amino acid symporter), member 3) - Mus musculus
           (Mouse)
          Length = 102

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -1

Query: 255 KCNKNMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAW 94
           KC +NM  R +  S    N +S+ ST   +  ++  +  M+ L     SP +AW
Sbjct: 12  KCQRNMFGRSTASSKGSSNSRSSSSTSPKKGPRREADALMEALWQQRGSPPDAW 65


>UniRef50_Q9XVI2 Cluster: Putative uncharacterized protein sys-1;
           n=3; Caenorhabditis|Rep: Putative uncharacterized
           protein sys-1 - Caenorhabditis elegans
          Length = 811

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 216 SMQPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWLTRKPGEQRR 64
           SMQP   Q  Q TP    TQQ+ +   QQ +   SSP+ +     P + ++
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQQRQLYSSPSPSRGPAAPAQNQK 107


>UniRef50_Q54WL8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 863

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 216 SMQPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWLT--RKPGEQRRSSI 55
           S +P   Q TQ  P  +  QQ+P Q  QQLQ   S   +  +     P +Q+R SI
Sbjct: 168 SNKPTYQQPTQQQPIQQQQQQQPMQQQQQLQNRVSPTPQHQVNFQGNPNQQQRPSI 223


>UniRef50_UPI0000F210FE Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 873

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 246 KNMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQLQG 121
           K   +R  MR   P+ ++++ S+PGV C    P  +   ++G
Sbjct: 205 KEKSIRRKMRVYSPDTLEASPSSPGVECDYLLPASFESFVEG 246


>UniRef50_A5W4I6 Cluster: Putative uncharacterized protein; n=2;
           Pseudomonas putida|Rep: Putative uncharacterized protein
           - Pseudomonas putida F1
          Length = 405

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -1

Query: 249 NKNMVMRMSMRSMQPENMQSTQSTPGVRCTQ---QRPEQYMQQL-QGTCSSPAEAWLTRK 82
           N+  +   +MR ++PE  Q+  +   VRC +   ++P  Y+  L +  C      W  R 
Sbjct: 291 NERRMASQAMRQLEPEQQQAVINEAAVRCARGEIRKPVAYLMGLIKRACQGEFTLWAART 350

Query: 81  PGEQ 70
             E+
Sbjct: 351 EDEK 354


>UniRef50_Q54F20 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1575

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 249 NKNMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQLQ 124
           N N   +      Q +N Q  QS  G +  QQ+P QY QQ Q
Sbjct: 449 NNNYYSQQYQYQQQQQNQQYQQSQYGQQQQQQQPNQYGQQQQ 490


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,128,125
Number of Sequences: 1657284
Number of extensions: 1970497
Number of successful extensions: 6821
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6817
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)