Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P16
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   125   7e-31
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   0.79 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   1.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.4  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        22   9.8  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      22   9.8  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    22   9.8  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  125 bits (301), Expect = 7e-31
 Identities = 50/74 (67%), Positives = 66/74 (89%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 194
           LCRKMGVPYCI+KGK+RLG LV+RKTCTC+ALT  E+ D+ + +K+VE IKTNFN+R+++
Sbjct: 179 LCRKMGVPYCIIKGKARLGTLVYRKTCTCVALTQFENADKPNLAKLVETIKTNFNDRFDD 238

Query: 195 LRKHWGGGVLGNKS 236
           +R+HWGGG+LG KS
Sbjct: 239 IRRHWGGGLLGPKS 252


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.4 bits (53), Expect = 0.79
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 102 SMCMSCGVQVHRGGTC 55
           ++C+ CG + H+ GTC
Sbjct: 572 NVCIRCGQEGHKAGTC 587


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 102 SMCMSCGVQVHRGGTC 55
           S+C+ CG   HR  +C
Sbjct: 311 SLCLHCGAADHRAASC 326


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 138  SFSKVVEAIKTNFNERYEELRKHWG 212
            +FS+ +     NF+  + EL++ WG
Sbjct: 1855 TFSRTIPFFGGNFSPEHTELQRTWG 1879


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 138  SFSKVVEAIKTNFNERYEELRKHWG 212
            +FS+ +     NF+  + EL++ WG
Sbjct: 1856 TFSRTIPFFGGNFSPEHTELQRTWG 1880


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 29  GRTILHCQGQVPPRCTCTPQDMHML 103
           G+T  +C  +    CTC  +D+H L
Sbjct: 63  GKTGGYCNSE--GLCTCRAEDLHFL 85


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 29  GRTILHCQGQVPPRCTCTPQDMHML 103
           G+T  +C  +    CTC  +D+H L
Sbjct: 50  GKTGGYCNSE--GLCTCRAEDLHFL 72


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -2

Query: 96  CMSCGVQVHRGGTC 55
           C+ CG Q H+   C
Sbjct: 488 CLRCGDQTHKASGC 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,367
Number of Sequences: 2352
Number of extensions: 4862
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)