Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P16
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   132   1e-31
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   132   1e-31
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   132   1e-31
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   132   1e-31
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   132   1e-31
AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi p...    28   4.1  
AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA...    28   4.1  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  132 bits (320), Expect = 1e-31
 Identities = 56/74 (75%), Positives = 68/74 (91%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 194
           LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+EE
Sbjct: 178 LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237

Query: 195 LRKHWGGGVLGNKS 236
           +R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  132 bits (320), Expect = 1e-31
 Identities = 56/74 (75%), Positives = 68/74 (91%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 194
           LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+EE
Sbjct: 178 LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237

Query: 195 LRKHWGGGVLGNKS 236
           +R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  132 bits (320), Expect = 1e-31
 Identities = 56/74 (75%), Positives = 68/74 (91%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 194
           LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+EE
Sbjct: 178 LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237

Query: 195 LRKHWGGGVLGNKS 236
           +R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  132 bits (320), Expect = 1e-31
 Identities = 56/74 (75%), Positives = 68/74 (91%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 194
           LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+EE
Sbjct: 178 LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237

Query: 195 LRKHWGGGVLGNKS 236
           +R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  132 bits (320), Expect = 1e-31
 Identities = 56/74 (75%), Positives = 68/74 (91%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 194
           LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+EE
Sbjct: 178 LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237

Query: 195 LRKHWGGGVLGNKS 236
           +R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251


>AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi
           protein.
          Length = 127

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRASFSKVVEAIK 167
           LC    VPY  V+ K  LG    V R    C   TN  S  ++  + + + I+
Sbjct: 71  LCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123


>AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA
           protein.
          Length = 127

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 15  LCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRASFSKVVEAIK 167
           LC    VPY  V+ K  LG    V R    C   TN  S  ++  + + + I+
Sbjct: 71  LCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,985,473
Number of Sequences: 53049
Number of extensions: 210532
Number of successful extensions: 654
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)