Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P15
         (867 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.03 |bem46||esterase/lipase |Schizosaccharomyces pombe|c...    37   0.004
SPAC6C3.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    29   1.1  
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb...    29   1.1  
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz...    28   2.0  
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb...    27   3.5  
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig...    26   8.0  
SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid phospho...    26   8.0  

>SPBC32H8.03 |bem46||esterase/lipase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 299

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +1

Query: 700 PIMLYCHGNSNSRAASHRIQLYK-FFQKMDFHTIAFDYRGYGDSTNLCPTEEGV 858
           P +LY H N+ +    HR+ + + F+  ++ +     YRGYG ST   P+E G+
Sbjct: 90  PTLLYFHANAGNMG--HRLPIARVFYSALNMNVFIISYRGYGKSTG-SPSEAGL 140


>SPAC6C3.03c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 100

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = -2

Query: 578 ILIGQLSTFE*YSTLRFLPPSIPLDEGSSKFTFRGHCTKLAKTRFLLNDFEYLNISGTTA 399
           ++I   +  + YS+ RFL PS  LD   +K+   G   ++A  R LLN     +I     
Sbjct: 10  VVIAIFTNAKRYSSFRFLFPSKNLDPNETKW---GWNIRIATFRSLLNTIP--SIPHWRT 64

Query: 398 TWKTNTPDVIVAPSSSI 348
            W T    ++  PS+ +
Sbjct: 65  MWGTVRVGIVHTPSAKV 81


>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 477

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +1

Query: 478 LNVNFEEPSSSGIEGGRNLSVEYHSK 555
           LN NFE P S+GIE     SV  HSK
Sbjct: 421 LNPNFELPESNGIEFAHEDSVLGHSK 446


>SPBC18H10.15 |ppk23||serine/threonine protein kinase
           Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 398

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +1

Query: 646 DKEELNRIMDHELATSKTPI---MLYCHGNSNSRAASHRIQLYKFFQKMDFHTIAFDYRG 816
           +K+   +I++ E    +  I    LY  GN+    + + I  Y+  +K++  +    YRG
Sbjct: 32  EKKRKRKILEEEEKAEERNIDACRLYLMGNTPELKSCNSIDDYEILEKIEEGSYGIVYRG 91

Query: 817 YGDSTN 834
              STN
Sbjct: 92  LDKSTN 97


>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 270

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 676 HELATSKTPIMLYCHGNSNSRAASHRIQLYKFFQKMDFHTIAFDYRGYGDSTNLCP 843
           +    +K P +L  HG   S+  + R    KF  K+D    A D R +GDS  + P
Sbjct: 13  YSATVAKHPPVLIFHGLLGSKR-NWRSLAKKFSCKLDRDIYAIDQRCHGDSPCVAP 67


>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
           E3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1647

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 493 EEPSSSGIEGGRNLSVEY-HSKVDNCPIKIGIWHILPRTSYERLKGNFQ-VDSDK 651
           E PSS  +E GR+L++ +  S++   P+      +  ++  E+LKG  Q V SDK
Sbjct: 70  EPPSSKSVEFGRHLNMRHDFSELLEQPLTTSKTRVF-KSFNEKLKGKPQLVKSDK 123


>SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid
           phospholipase C |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 424

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 449 RFLLNDFEYLNISGTTATWKTNT 381
           RF +ND E + I+GTT   + NT
Sbjct: 216 RFSMNDKELVEIAGTTCDSRLNT 238


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,756,401
Number of Sequences: 5004
Number of extensions: 82185
Number of successful extensions: 223
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)