Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P15
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...    88   7e-18
Z82270-1|CAB63203.1|  914|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z49966-4|CAA90244.1|  360|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z78542-10|CAB01751.2|  428|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL031620-6|CAA20929.2|  428|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z81542-5|CAB04420.2|  433|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z72518-2|CAA96700.1|  613|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z69787-10|CAH65466.1|  398|Caenorhabditis elegans Hypothetical p...    28   7.5  

>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
 Frame = +1

Query: 397 VAVVPLIFKYSKSFRRNLVFANFVQWPLNVNFEEPSSSGIEG-GRNLSVEYHSKVDNCPI 573
           V  +P++  +   + + + F NF + P N ++ + +S+ ++  GR+L +   S       
Sbjct: 24  VIFLPILVYFLPRYTQFIFFLNFRRLP-NTDYNDLASNNVKSIGRSLHLPGKSG------ 76

Query: 574 KIGIWHILPRTSYERLKGNFQVDSDKEELNRIMDHELATSKTPIMLYCHGNSNSRAASHR 753
           +IG+WHILP     +L   ++ +  K    R  D  +  S+  I+ Y HGNS  R   HR
Sbjct: 77  RIGVWHILPN----KLSLEWRTEG-KHPTERDFDDMMRDSENQIIFYAHGNSFDRTFYHR 131

Query: 754 IQLYKFFQKMDFHTIAFDYRGYGDSTNLCPTEEGVVE 864
           +++Y      ++H + FDYRGYGDS    PTE+G+VE
Sbjct: 132 VEMYNLLSDCNYHVVCFDYRGYGDSEG-TPTEKGIVE 167


>Z82270-1|CAB63203.1|  914|Caenorhabditis elegans Hypothetical
           protein F53H2.1 protein.
          Length = 914

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 502 SSSGIEGGRNLSVEYHSKVDNCPIKIGIWHILPRTSYERL-KGNFQVDSDKEE 657
           SS G  GG  L  E+H+   N  ++  IWH+ P     R+ +   ++DS K++
Sbjct: 439 SSIGNPGGPKLE-EFHNATSNLNVEPNIWHVTPGKDKNRIDRYQSELDSSKQQ 490


>Z49966-4|CAA90244.1|  360|Caenorhabditis elegans Hypothetical
           protein F35C11.4 protein.
          Length = 360

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 130 ILFKYLKKS*VNSMFSIYPVLMMHLLS**IFCDFRSACC 246
           IL  +L  S + S+F  YP+L   +LS   F D R+  C
Sbjct: 229 ILISFLSCSAIKSLFKSYPILTFLILSIACFLDLRTHGC 267


>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
           protein C53A5.2 protein.
          Length = 1150

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 754 IQLYKFFQKMDFHTIAFDYRG 816
           +QL  +F ++DFHT A D RG
Sbjct: 354 VQLIDYFSQIDFHTNAIDTRG 374


>Z78542-10|CAB01751.2|  428|Caenorhabditis elegans Hypothetical
           protein C18B12.6 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 616 RLKGNFQVDSDKEELNRIMDHELATSKTPIMLYCHGNSNSRAASHRIQLYKF 771
           RL G F+V   KEE  +I+     +   P+M++ H    S   SHRI+ + F
Sbjct: 227 RLHGKFKVRKGKEE--KIV----MSISNPMMMFDHQEKQSGNISHRIEKFNF 272


>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical
           protein C53A5.2 protein.
          Length = 1150

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 754 IQLYKFFQKMDFHTIAFDYRG 816
           +QL  +F ++DFHT A D RG
Sbjct: 354 VQLIDYFSQIDFHTNAIDTRG 374


>AL031620-6|CAA20929.2|  428|Caenorhabditis elegans Hypothetical
           protein C18B12.6 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 616 RLKGNFQVDSDKEELNRIMDHELATSKTPIMLYCHGNSNSRAASHRIQLYKF 771
           RL G F+V   KEE  +I+     +   P+M++ H    S   SHRI+ + F
Sbjct: 227 RLHGKFKVRKGKEE--KIV----MSISNPMMMFDHQEKQSGNISHRIEKFNF 272


>Z81542-5|CAB04420.2|  433|Caenorhabditis elegans Hypothetical
           protein F49A5.8 protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
 Frame = +1

Query: 316 ICILVPLYTAGILLLGATITSGVFVFHVAV-VPLIFKYSKSFRRNLVFANFVQWPL---N 483
           + I++ L    ILL  +  TSGV+VF +A+ V  I  +S ++ ++ ++     +P+   N
Sbjct: 86  LAIILCLVHLMILLRKSLRTSGVYVFMIAICVSDILNFSLAYPKDAIYYKHSWFPVPIHN 145

Query: 484 VNFEEPSSSG-IEGGRNLSVEYHSKVDNCPIKIGIWHILPRTSYERLKGNFQVDSDKEEL 660
            N +E    G IE   +L  +      N   ++ IW  +   S   L   F +++  ++L
Sbjct: 146 NNGDECVKYGWIE--VDLVAQAMELAHNVTRRLSIWLAMVMASLRTLAVAFPMNNQIQKL 203


>Z72518-2|CAA96700.1|  613|Caenorhabditis elegans Hypothetical
          protein ZC374.2 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 8  PMIFFYQTQSYQTNVVKSPKVRII 79
          P++F Y T S   +VV+ PK RI+
Sbjct: 7  PLLFLYLTVSQPISVVREPKARIV 30


>Z69787-10|CAH65466.1|  398|Caenorhabditis elegans Hypothetical
           protein C44C10.11 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
 Frame = +1

Query: 394 HVAVVPLIFKYSKSFRRNLVF---ANFVQWPLNVNFEEPSSSGIEGGRNLSVEYH----- 549
           ++A +P + K + + ++ L+     N +   L  +   P  + I+G   +++E       
Sbjct: 60  YIAYLPTVVKVTPAHKKRLLMNAELNNLFENLRTHKTGPLDTEIDGANFVAIEKDVEPHL 119

Query: 550 -SKVDNCP---IKIGIWHILPRTSYERLKGN-FQVDSDKEELN 663
             K+   P   +K+ IW +LPR  YE    N  ++D+ K+EL+
Sbjct: 120 IRKIQLLPNGMLKL-IWPVLPRNEYESNSNNQEEIDATKKELS 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,487,462
Number of Sequences: 27780
Number of extensions: 449845
Number of successful extensions: 1196
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)