Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_P11
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 35 0.011
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 34 0.024
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 33 0.056
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 30 0.30
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 29 0.53
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 28 1.2
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 28 1.2
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 27 2.1
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 3.7
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 27 3.7
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 26 4.9
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 26 4.9
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 26 4.9
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 26 4.9
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 26 4.9
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 26 6.5
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 6.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.5
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 35.1 bits (77), Expect = 0.011
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 665 RITLXKFEFVKVLGKGTFGKVVL 733
R+TL F F+ VLGKG FGKV+L
Sbjct: 658 RVTLDDFTFLAVLGKGNFGKVML 680
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 33.9 bits (74), Expect = 0.024
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 662 RRITLXKFEFVKVLGKGTFGKVVL 733
+RI L F F+ VLGKG FGKV+L
Sbjct: 676 KRIGLEDFTFLSVLGKGNFGKVML 699
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 32.7 bits (71), Expect = 0.056
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 668 ITLXKFEFVKVLGKGTFGKVVLXR 739
+T+ FE +KV+GKG+FGKV+ R
Sbjct: 225 LTIDAFELLKVVGKGSFGKVMQVR 248
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 30.3 bits (65), Expect = 0.30
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 278 GWLQKRGEHIRNWRDRYFILFDT 346
GW++KR + W+ RYF+L T
Sbjct: 703 GWMRKRSDRYGVWKSRYFVLKGT 725
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 29.5 bits (63), Expect = 0.53
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 665 RITLXKFEFVKVLGKGTFGKVVL 733
R++L F +KV+GKG FG+V L
Sbjct: 87 RLSLEDFSTIKVIGKGAFGEVRL 109
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 476 GLQWTTVIERNFSVDNEKEREEWVKAIR 559
G +W T F+++N+K EEW K R
Sbjct: 3 GSKWETEETNQFAIENQKLEEEWRKKRR 30
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 56 FLARKNQIFSH*VICIQENVLYWCSAC 136
F A +++F+ + CI + LYWC C
Sbjct: 343 FCAGCSEVFNVNIPCIYRDDLYWCQTC 369
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 433 HGCGQTSPLHFYH 471
HGC QT+P HF H
Sbjct: 144 HGCFQTAPFHFSH 156
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.6 bits (56), Expect = 3.7
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +2
Query: 275 EGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFT--VRDCQIMAVDK 448
+G+L ++G WR RYF L + LV F+ + L++ T V D ++
Sbjct: 585 DGYLCQQGGDCPYWRRRYFQLIGS-KLVAFQQFSKVRRATIDLSEATHIVDDNHYSDEEE 643
Query: 449 PRPYTFTIRGLQ--WTTVIERNFSVDNEKEREEWVKAIREVASQLS 580
Y + G + ++ +F + E++EW+ +R+ Q S
Sbjct: 644 LEGYLYFESGFRIIFSNGDYIDFYAETVGEKDEWMSTLRQHLGQCS 689
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 662 RRITLXKFEFVKVLGKGTFGKVVLXR 739
R + FE K LGKG FG+V L +
Sbjct: 82 REFHIGMFEIGKPLGKGKFGRVYLAK 107
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -2
Query: 188 PHVCLLRAAAQFSPILVRTQSTNIKH---FLECKSLNAKKFGFSLQENINVGKRRYDV 24
PH CLLR F P R +S + H +L SL + F QE + +YD+
Sbjct: 218 PHFCLLREEVTFGP-ASRNRSKELAHQKFYLLHLSLLREYLEFEFQECRSTFTFKYDL 274
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 683 FEFVKVLGKGTFGKVVLXR 739
F ++++GKGTFG+V L R
Sbjct: 302 FTALRLIGKGTFGQVYLVR 320
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 692 VKVLGKGTFGKVVLXR 739
+K++GKGTFG+V L R
Sbjct: 269 LKLIGKGTFGQVYLVR 284
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 668 ITLXKFEFVKVLGKGTFGKVVLXR 739
+T FE +++LG+G GKV L R
Sbjct: 150 VTPHSFEKIRLLGQGDVGKVYLVR 173
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 284 LQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTV 418
+Q+ E + + YF+ F + F+ PE NY +PLN + V
Sbjct: 529 VQEAREKVELFGSYYFVCFRS-----FEQDPELANYLEPLNMYIV 568
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 346 GGPGGLQDPAGAEQLQGPSQQVHRTRLP 429
G P A A+Q Q QQ+HRT P
Sbjct: 440 GNPQAFSQQAFAQQQQQQQQQLHRTSNP 467
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 702 STFTNSNFXKVMRRGSRKLVPSCAMSRSSASDIDAE 595
ST +SN K + +L+PS S SA + DA+
Sbjct: 387 STILDSNELKDIYLSKNRLIPSVTKSLPSAMEFDAD 422
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 680 KFEFVKVLGKGTFGKVV 730
++ V++LG GTFGKV+
Sbjct: 361 RYTVVRLLGHGTFGKVI 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,801,170
Number of Sequences: 5004
Number of extensions: 53921
Number of successful extensions: 174
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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