Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P10
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.30 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 21/79 (26%), Positives = 34/79 (43%)
 Frame = +3

Query: 342 KMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGTAGDVLTLHLNKAYENFILPGLAVY 521
           K   +H+   L E +S+  + D R++ N   +    A    T H    Y +F +   A  
Sbjct: 132 KSSTKHYAALLTERSSLVLRNDFRLMSNNLNKNNVVATGRFTFHKKNLYYSFYISDKA-- 189

Query: 522 ANPENLEKYKTYEKRPLEE 578
           A P +L+ +   E   LEE
Sbjct: 190 ARPRSLQ-FVDSEGNILEE 207


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 283 VFLVCCENIVGTIIADFITEARSPNIFAFFSS 188
           +FL  C      +I+   TEA++  I  FF+S
Sbjct: 1   MFLKLCLLASALLISTHQTEAKTDKILCFFAS 32


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 621 NNPLSFSQMESCEYFLLEDV 562
           NN  ++S + +C Y+ L+D+
Sbjct: 104 NNFKTYSNVTTCSYYSLDDL 123


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 341 RHFTTFLVKWWWPSASQDKSVPCLL*KHCR 252
           R F    + W +P  S+DK    LL K  R
Sbjct: 201 RGFDGLDIDWEYPKGSEDKKNYVLLLKELR 230


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 496 KFSYALFKCSVKTSPAVPTPSTN 428
           K S A    SV T   +PTPST+
Sbjct: 208 KASPAAAPRSVATPTGIPTPSTS 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,889
Number of Sequences: 336
Number of extensions: 4143
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)