Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P10
         (802 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    26   1.2  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       24   4.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.8  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 750 LEAFQ*HSQELRSLTCAMKL*DARAVESMVQNCSLLHE 637
           LE  +   Q L    CAMK  +A+ +E +   C LL E
Sbjct: 117 LELLRATIQRLEEQNCAMKEQNAKLLEQITGMCQLLQE 154


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  KCYSLSFPQILFFHYVTEFDTVI 163
           KC+  S   ILF    +EFD V+
Sbjct: 28  KCFDCSVTSILFLVSTSEFDQVL 50


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 540 EKYKTYEKRPLEENTHSSPFVK-RTMD 617
           EK KTYE   +   T S+PF+  RT++
Sbjct: 820 EKIKTYELNTITYGTASAPFLAIRTLN 846


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,172
Number of Sequences: 2352
Number of extensions: 16248
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)