Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_P09
(579 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 0.81
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 24 0.81
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 3.3
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 22 3.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 5.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 5.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 5.7
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 5.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 5.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 5.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 5.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 5.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 5.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 5.7
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 21 7.6
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.2 bits (50), Expect = 0.81
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 354 RLRVGKKYHQCCKCASLFINK*I*NSDLK 440
R G K QC KC +NK + NS +K
Sbjct: 251 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 279
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 24.2 bits (50), Expect = 0.81
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 354 RLRVGKKYHQCCKCASLFINK*I*NSDLK 440
R G K QC KC +NK + NS +K
Sbjct: 9 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 37
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 240 KFMNGSKPRNTPVTARPAFS 181
+++N +PRN P A P+ S
Sbjct: 23 RWLNSQQPRNVPNFAAPSTS 42
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 343 QTLVDLEWARNITNAVNVLHFSSINKY 423
+TL L W + N + +LH I Y
Sbjct: 187 ETLNQLIWFDEVVNELRILHGVEIRDY 213
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 84 LIPYYNILKSTLQCQ 128
L+PYYN K +L+ Q
Sbjct: 23 LVPYYNFEKFSLEHQ 37
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 75 NGAPPRSTPPLSTPSNS 91
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 231 NGSKPRNTPVTARPAFS 181
NG+ PR+TP + P+ S
Sbjct: 119 NGAPPRSTPPLSTPSNS 135
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KLNSLTKFDGLEIHLISKNPR 75
K+N L + D EI ++ KNP+
Sbjct: 11 KINVLQQNDRREIIILRKNPQ 31
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,992
Number of Sequences: 336
Number of extensions: 2326
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -