Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P06
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical pr...   155   5e-38
U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical pr...   155   5e-38

>U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical
           protein F38A5.1b protein.
          Length = 575

 Score =  155 bits (375), Expect = 5e-38
 Identities = 80/183 (43%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
 Frame = +1

Query: 268 YLPPEIGHFITRLIPKGKSEDCMQKERRTLHEQLGLPLHRPVFRRGNAF-IDKSGGYLVN 444
           YLPP     +   +P   +++  +  R  LH+   LP  +PV R   A  +      L N
Sbjct: 304 YLPPGWVSLLHLQLPTKWTDNEQRNYRIRLHKLFNLPSSKPVLRLSQALALHSESARLTN 363

Query: 445 ------PHEAMPIQASKSDVTVALVRGRYAYHHYMQDNFNDDGWGCAYRSMQTIFSWFRY 606
                 PH ++       ++T   V G Y YHHYMQD  +D GWGCAYRS QTI+SWF  
Sbjct: 364 KKLIREPHLSITNYQPVGEITT--VNGPYNYHHYMQDGIDDSGWGCAYRSFQTIWSWFIL 421

Query: 607 QGYTDVEVPTHKEIQQCLVKIGDKQSTFIGSKQWIGSTEVMFCLETLLGVQSRIIFANTG 786
            GYTD  VP+H+EIQQ LV I DKQ+ F+GS+QWIGSTE+ F L  LL ++ R I  N+G
Sbjct: 422 NGYTDKPVPSHREIQQALVDIQDKQAKFVGSRQWIGSTEISFVLNELLKLECRFIATNSG 481

Query: 787 TEL 795
            E+
Sbjct: 482 AEV 484


>U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical
           protein F38A5.1a protein.
          Length = 589

 Score =  155 bits (375), Expect = 5e-38
 Identities = 80/183 (43%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
 Frame = +1

Query: 268 YLPPEIGHFITRLIPKGKSEDCMQKERRTLHEQLGLPLHRPVFRRGNAF-IDKSGGYLVN 444
           YLPP     +   +P   +++  +  R  LH+   LP  +PV R   A  +      L N
Sbjct: 318 YLPPGWVSLLHLQLPTKWTDNEQRNYRIRLHKLFNLPSSKPVLRLSQALALHSESARLTN 377

Query: 445 ------PHEAMPIQASKSDVTVALVRGRYAYHHYMQDNFNDDGWGCAYRSMQTIFSWFRY 606
                 PH ++       ++T   V G Y YHHYMQD  +D GWGCAYRS QTI+SWF  
Sbjct: 378 KKLIREPHLSITNYQPVGEITT--VNGPYNYHHYMQDGIDDSGWGCAYRSFQTIWSWFIL 435

Query: 607 QGYTDVEVPTHKEIQQCLVKIGDKQSTFIGSKQWIGSTEVMFCLETLLGVQSRIIFANTG 786
            GYTD  VP+H+EIQQ LV I DKQ+ F+GS+QWIGSTE+ F L  LL ++ R I  N+G
Sbjct: 436 NGYTDKPVPSHREIQQALVDIQDKQAKFVGSRQWIGSTEISFVLNELLKLECRFIATNSG 495

Query: 787 TEL 795
            E+
Sbjct: 496 AEV 498


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,022,998
Number of Sequences: 27780
Number of extensions: 380750
Number of successful extensions: 835
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)