Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_P04
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 693  VLHSLVXKSNIKRQLEVYASGGD 761
            +LH L   +N   ++  Y SGGD
Sbjct: 1163 ILHGLKKYTNYSMEVLAYTSGGD 1185


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 251 VAKVNKEFLDHVRHFIIRRPVIFRLVVFCGLCFIVAIGF 135
           +AK N         F IR+ +IF L+    + F++++ F
Sbjct: 727 IAKHNVRTFSAGGFFDIRKNLIFSLIANVAMYFVISVQF 765


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 567 DEFVYQFQSFAQYRSRTTKLSPAEIEAL 650
           +EF     +  + +SRT  ++P EIE +
Sbjct: 170 NEFTTHVMNLLREQSRTRPITPKEIERM 197


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 432 HRCHGSIVLC 403
           HRCHG++  C
Sbjct: 347 HRCHGNLQSC 356


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 441 PGGPKPEQRFHSFYNYCDLFN 503
           PG    E  F SFY  CD  +
Sbjct: 787 PGKYTAEAGFMSFYEICDFLH 807


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/70 (17%), Positives = 31/70 (44%)
 Frame = -2

Query: 219 CQAFYNKKTCHIPARSVLWTVLHSRHRIRNLPHYNRRWNTWLLIESNEYSYVRVYASERV 40
           C  +YN K       + L+ +++    +   P Y  +     ++++N+Y    +     V
Sbjct: 273 CYCYYNSKMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTGRKTVLKTNKYCNFIILFYLSV 332

Query: 39  FSLRITYSAI 10
           F + + Y+++
Sbjct: 333 FVILVYYASL 342


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 196 LLIIKCLTWSRNSLFT 243
           L++ KC+T S +SL+T
Sbjct: 230 LILAKCITSSLSSLYT 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,483
Number of Sequences: 336
Number of extensions: 4144
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)