Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_P02
(829 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 54 2e-07
04_04_0819 - 28312667-28313219,28315157-28316430 44 1e-04
02_05_0264 + 27263562-27264830 44 1e-04
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 41 0.001
06_03_0915 - 25929433-25930893 39 0.004
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 36 0.030
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 36 0.039
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 36 0.052
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 35 0.069
07_03_0546 - 19325526-19326054,19327109-19327631,19327898-193281... 33 0.21
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 33 0.37
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 31 0.85
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 31 1.1
01_05_0586 + 23443371-23444645 31 1.1
11_01_0643 - 5174154-5174254,5174296-5174346,5174611-5174739,517... 29 6.0
06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478 29 6.0
02_05_0469 + 29297209-29297527,29297847-29297961,29298060-292982... 29 6.0
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 28 7.9
01_03_0016 + 11673258-11673854 28 7.9
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Frame = +2
Query: 293 SDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSR 472
+ ++ N++ S +G+G+L +P AF+ AG + G G G +C+ LLV
Sbjct: 29 TSAQTLGNVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLVDCRD---- 84
Query: 473 VAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQ 652
K+ ET + G + F R + + + G Y+I + +++
Sbjct: 85 --KLEEKESEETYHGHYTYGDLGEKCFGTIGRCLTEILILVSQAGGSVAYLIFIGQNLHS 142
Query: 653 IVDYFYADNGINETMYCLMFLVPILI-FTQIKNLKYLXPFSGFANILLVLTXLICL 817
+ ++ + L+P+ I + I++L L PFS FA++ VL I +
Sbjct: 143 VFSQL-----MSPAAFIFAILLPMQIALSFIRSLSSLSPFSIFADVCNVLAMAIVI 193
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 44.4 bits (100), Expect = 1e-04
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Frame = +2
Query: 284 HPNSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLV----K 451
H +S ++FAN+ + +GSG+L +P F G + G + + + HC+ LLV +
Sbjct: 33 HLSSQPKTFANVFIAVVGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRRR 92
Query: 452 TSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVIL 631
+ D ++A LG A GP A R +D + + C Y+I
Sbjct: 93 LAYDHPKIASFGDLGAA-------VCGP--------AGRHVVDAMLVLSQASFCVGYLIF 137
Query: 632 LVESVQQIVDYFYADNGINETMYC--LMFLVPILIF----TQIKNLKYLXPFSGFANIL 790
+ ++ + Y D+ + + +F+ +L F IK L L P S FA+++
Sbjct: 138 ISNTMAHL--YPVGDSSPSSPLLTAKAIFIWVMLPFQLGLNSIKTLTLLAPLSIFADVV 194
>02_05_0264 + 27263562-27264830
Length = 422
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Frame = +2
Query: 290 NSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVS 469
+S ++FAN+ + +G+G+L +P F G G + + + +C+ LLV + ++
Sbjct: 33 SSQPKTFANVFIAVVGAGVLGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLVACRRRLA 92
Query: 470 -RVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESV 646
K+ S G + +AVF GP R+ +D + + C Y+I + ++
Sbjct: 93 DEHPKIASFG--DLGDAVF-RGP---------GRLAVDTMLVLSQASFCVGYLIFISNTM 140
Query: 647 QQIVDYFYADNG--INETMYCLMFLVPI-LIFTQIKNLKYLXPFSGFANIL 790
+ F + ++ + ++P L IK L L P S FA+++
Sbjct: 141 AHLYPVFAPSSNALLSPKALFIWAMLPFQLGLNSIKTLTLLAPLSIFADVV 191
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Frame = +2
Query: 302 RSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAK 481
++ N++ S +G+G+L +P AF+ +G + G G G +C+ LL+ + +
Sbjct: 20 QTLGNIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLLDCRDKLREQEE 79
Query: 482 VPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVD 661
V G + G + F R F + + + G Y++ + +++ +
Sbjct: 80 VDHDGN-------YTYGDLGEKCFGAIGRYFTEVTIILSQTGGSVAYLVFIGQNICSVFP 132
Query: 662 YFYA-----DNGINETMYCLMFLVPI-LIFTQIKNLKYLXPFSGFANILLVL 799
A ++ L L+P + I++L L PFS A+ VL
Sbjct: 133 TTAAGGEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSILADACTVL 184
>06_03_0915 - 25929433-25930893
Length = 486
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 314 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 451
NL S +G+GI+A+PA K G VG+ +++G + + LLV+
Sbjct: 82 NLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVR 127
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +2
Query: 314 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 493
NL + +G+GI+A+PA+ K G I GI I++ + + +LV+ S + K+ S
Sbjct: 50 NLSTTIVGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSHE----GKITSY 105
Query: 494 GY 499
G+
Sbjct: 106 GW 107
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 35.9 bits (79), Expect = 0.039
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 314 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 493
NL + +G+GI+A+PA+ K G I GI I++ + + +LV+ S K+ S
Sbjct: 90 NLSTTIVGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSHQ----GKITSY 145
Query: 494 GY 499
G+
Sbjct: 146 GW 147
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 35.5 bits (78), Expect = 0.052
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +2
Query: 284 HPNSDVRSFA----NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 451
H + D SF+ NL + +G+GI+A+PA K G + G+ ++ + + LLV+
Sbjct: 30 HDHFDGASFSGAVFNLSTTIVGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVR 89
Query: 452 TSQDVSRVAKVPSLGYA 502
S+ V + ++G A
Sbjct: 90 FSRAVGATSYGEAMGDA 106
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 35.1 bits (77), Expect = 0.069
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 314 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 493
NL + +G+GI+A+PA K G G+ ++ + + LLV++ SR A PS
Sbjct: 37 NLSTTIVGAGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVRS----SRAAGAPSY 92
Query: 494 G 496
G
Sbjct: 93 G 93
>07_03_0546 -
19325526-19326054,19327109-19327631,19327898-19328152,
19328283-19328472,19328473-19328525,19329295-19329555,
19329670-19329720,19329873-19330121,19330225-19330453,
19332245-19332559
Length = 884
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 552 FQELHGYLSTGQWLLLFLALVLYMSFYLWS 641
F + G ++ G W+LL A VLY+ Y+W+
Sbjct: 579 FSSVLGSVADGSWVLLVFAAVLYLIMYIWN 608
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 32.7 bits (71), Expect = 0.37
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Frame = +2
Query: 332 LGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETV 511
+GSG+LA+P + G ++G ++ YI + LL + V + Y + V
Sbjct: 70 IGSGVLALPWSVAQMGWVLGPIALVVCAYITYYTAVLLCDCYRTPDPVHGKRNYTYMDVV 129
Query: 512 EAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVD---YFY---- 670
+ GP+ + + A + GA Y I S+ +V + Y
Sbjct: 130 RS--CLGPRDV--------VVCGIAQYAILWGAMVGYTITTATSIMSVVRTNCHHYKGPD 179
Query: 671 ADNGINETMYCLMFLVPILIFTQIKNLKYLXPFSGFANIL 790
A G + TMY ++F + ++ +Q +L+ + S A ++
Sbjct: 180 ATCGSSGTMYMVLFGLAEVVLSQCPSLEGVTLISVVAAVM 219
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 680 GINETMYCL-MFLVPILIFTQIKNLKYLXPFSGFANILLVLTXLICLYY 823
G+ ++ L +FL P+ F +I K F G + +L LICL+Y
Sbjct: 13 GLAGNIFALALFLSPVTTFKRILKAKSTERFDGLPYLFSLLNCLICLWY 61
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 31.1 bits (67), Expect = 1.1
Identities = 33/160 (20%), Positives = 67/160 (41%)
Frame = +2
Query: 311 ANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPS 490
A+++ + +GSG+L++ A G +VG ++ I + LL + V+ +
Sbjct: 51 AHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADCYRTGDPVSGKRN 110
Query: 491 LGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFY 670
Y + V A + G Q + A+ +TI + + + + +
Sbjct: 111 YTYMDAV-AAYLGGWQVWSCGVFQYVNLVGTAIGYTITASISAAAVHKANCYHK--NGHD 167
Query: 671 ADNGINETMYCLMFLVPILIFTQIKNLKYLXPFSGFANIL 790
AD G+ +T Y ++F V + F+ + N L S A ++
Sbjct: 168 ADCGVYDTTYMIVFGVVQIFFSMLPNFSDLSWLSILAAVM 207
>01_05_0586 + 23443371-23444645
Length = 424
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 302 RSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAK 481
R+ NL + G G+L+MP A G + + +++G +C + L+ + + +A
Sbjct: 41 RTCLNLTNAVSGIGVLSMPYAVSQGGWL-SLLLFVLVGAVCYYTGTLIERCMRADGSIAS 99
Query: 482 VPSLG 496
P +G
Sbjct: 100 YPDIG 104
>11_01_0643 -
5174154-5174254,5174296-5174346,5174611-5174739,
5174869-5175118,5175220-5177157
Length = 822
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 363 RSRMQERLLAFSGQLFWVTFARTAFICW*KHRKMYH 470
RS+++E L+A+SGQ W + IC + + YH
Sbjct: 630 RSKLEELLVAYSGQHPWEPRYKLDLICGVEEPQSYH 665
>06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478
Length = 393
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 326 SSLGSGILAMPAAFKNAGTI-VGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLG 496
+S G GIL+MP A G + + IF I + IC + LL + S V P +G
Sbjct: 3 TSQGVGILSMPYALSQGGWLSLAIF--ITIAAICFYTGILLQRCIDSSSLVKTYPDIG 58
>02_05_0469 +
29297209-29297527,29297847-29297961,29298060-29298255,
29298427-29298540,29298695-29298868,29299326-29299520,
29299666-29299788,29299892-29300004,29300117-29300237,
29300363-29300623,29301712-29301921
Length = 646
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 683 INETMYCLM--FLVPILIFTQIKNLKYLXPFSGFANILLVL 799
I+ET+Y + F+ P L IK + PFSGF N + +L
Sbjct: 207 ISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPMYIL 247
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +2
Query: 299 VRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVA 478
V + A+++ + +GSG+L++ A G ++G + I C LL + V
Sbjct: 44 VTASAHIITAVIGSGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSLLADCYRSPDPVH 103
Query: 479 KVPSLGYAETVEA 517
+ Y + V A
Sbjct: 104 GKRNYTYGQAVRA 116
>01_03_0016 + 11673258-11673854
Length = 198
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 564 HGYLSTGQWLLLFLALVLYMSFYLWSQFSR 653
HG TG +++ +ALVL + Y W FSR
Sbjct: 32 HGRALTGCLVVVNVALVLLVYLYFWRVFSR 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,270,923
Number of Sequences: 37544
Number of extensions: 405014
Number of successful extensions: 1255
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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